RNA–Protein interactions for RNA: ENST00000236192.11

VAMP4-201, Transcript of vesicle associated membrane protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VAMP4, Length 5,159 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-201ENST00000236192 ZNF805Q5CZA5 627 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 PRAMEF20Q5VT98 475 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 CLEC2AQ6UVW9 174 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 DMRTC2Q8IXT2 367 aaPredicted RBP11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC16A11Q8NCK7 471 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 OR4N2Q8NGD1 307 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 FAM216AQ8WUB2 273 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC35A4Q96G79 324 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 AKR1A1P14550 325 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF43P17038 809 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 HLA-BQ31612 363 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 NUFIP2Q7Z417 695 aaKnown RBP11.55□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF664Q8N3J9 261 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 OR10P1Q8NGE3 313 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 GPA33Q99795 319 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 MFRPQ9BY79 579 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 GCM2O75603 506 aaPredicted RBP11.55□□□□□ -0.56
VAMP4-201ENST00000236192 MLC1Q15049 377 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 CCSMST1Q4G0I0 132 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 EMC4Q5J8M3 183 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 GFI1BQ5VTD9 330 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC48A1Q6P1K1 146 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 WDR73Q6P4I2 378 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 GVQW1Q8N7I0 195 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 OR10J5Q8NHC4 309 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 PDFQ9HBH1 243 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC2A4RGQ9NR83 387 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 KCNIP1Q9NZI2 227 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 HSPB7Q9UBY9 170 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 LEFTY1O75610 366 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 CST7O76096 145 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 ADH5P11766 374 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 FUT3P21217 361 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 NNATQ16517 81 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC24A5Q71RS6 500 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 GPBAR1Q8TDU6 330 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 TMEM234Q8WY98 164 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 MYEOVQ96EZ4 313 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 HDAC8Q9BY41 377 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 VN1R1Q9GZP7 353 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 NAT8BQ9UHF3 227 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 SLC22A13Q9Y226 551 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 MTCH2Q9Y6C9 303 aa11.55□□□□□ -0.56
VAMP4-201ENST00000236192 A6NDN8 102 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 M0QZQ0 153 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 NPSP0C0P6 89 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 CPMP14384 443 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 PAAF1Q9BRP4 392 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 LPAR2Q9HBW0 351 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 PRR13Q9NZ81 148 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 CYR61O00622 381 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 SLC6A8P48029 635 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 C1orf194Q5T5A4 169 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 TRBV5-4A0A0C4DH59 114 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF816-ZNF321PA0A0X1KG74 233 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 FAM24AA6NFZ4 105 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 TGM5O43548 720 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 IGHEP01854 428 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 SUCLG1P53597 346 aaKnown RBP11.54□□□□□ -0.56
VAMP4-201ENST00000236192 ZNF750Q32MQ0 723 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 PDLIM3Q53GG5 364 aaPredicted RBP11.54□□□□□ -0.56
VAMP4-201ENST00000236192 SLC25A26Q70HW3 274 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 C16orf70Q9BSU1 422 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 PPP1R3CQ9UQK1 317 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 A0A0G2JK05 382 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 LOC102723971A0A1B0GUV8 181 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 EOMESO95936 686 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 AARDQ4LEZ3 155 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 C12orf54Q6X4T0 127 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 SPACA7Q96KW9 195 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 PCGF1Q9BSM1 259 aa11.54□□□□□ -0.56
VAMP4-201ENST00000236192 RALYQ9UKM9 306 aaKnown RBP11.54□□□□□ -0.56
VAMP4-201ENST00000236192 SHROOM3Q8TF72 1996 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 GUSBP08236 651 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 MMP9P14780 707 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 MTCP1P56278 107 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 COL10A1Q03692 680 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 PLPPR5Q32ZL2 321 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 MUCL1Q96DR8 90 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 SLC46A1Q96NT5 459 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 MAGT1Q9H0U3 335 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 CXCL16Q9H2A7 254 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 SIPA1L3O60292 1781 aaPredicted RBP11.53□□□□□ -0.56
VAMP4-201ENST00000236192 CDC42EP2O14613 210 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 DEDDO75618 318 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 FCGR2AP12318 317 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 COX5AP20674 150 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 RND3P61587 244 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 RAB35Q15286 201 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 ANKRD39Q53RE8 183 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 VWA1Q6PCB0 445 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 MRGPRGQ86SM5 289 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 BORCS8Q96FH0 119 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 BMFQ96LC9 184 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 RNF2Q99496 336 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 ZPBPQ9BS86 351 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 KCNK15Q9H427 330 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 CLDN1O95832 211 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 CXCL17Q6UXB2 119 aa11.53□□□□□ -0.56
VAMP4-201ENST00000236192 WBP1LQ9NX94 342 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms