RNA–Protein interactions for RNA: ENST00000231130.3

PCDHB3-201, Transcript of protocadherin beta 3, humanhuman

APPRIS P1 BASIC

Gene PCDHB3, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB3-201ENST00000231130 RARRES2Q99969 163 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SLCO5A1Q9H2Y9 848 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SOHLH2Q9NX45 425 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC5A6Q9Y289 635 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 POLR1DQ9Y2S0 133 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 A8MWP6 167 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SOCS1O15524 211 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SYT7O43581 403 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 HNRNPA1P09651 372 aaKnown RBP eCLIP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 RPL12P30050 165 aaKnown RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 GKN2Q86XP6 184 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 OR10J5Q8NHC4 309 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 THAP3Q8WTV1 239 aaPredicted RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 BMFQ96LC9 184 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 LMAN1LQ9HAT1 526 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC2A8Q9NY64 477 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 LUZP4Q9P127 313 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 RAB22AQ9UL26 194 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 RCL1Q9Y2P8 373 aaKnown RBP12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 HS3ST3B1Q9Y662 390 aa12.56□□□□□ -0.4
PCDHB3-201ENST00000231130 CNOT4O95628 575 aaKnown RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 PGA4P0DJD7 388 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 PGA5P0DJD9 388 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 VSIG8P0DPA2 414 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 GPR3P46089 330 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 OR1D4P47884 311 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 CX3CR1P49238 355 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 SCAND1P57086 179 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF117Q03924 483 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 GLO1Q04760 184 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 ISXQ2M1V0 245 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 FAM180AQ6UWF9 173 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 MVB12AQ96EY5 273 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 TBL1XR1Q9BZK7 514 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 UNC13CQ8NB66 2214 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM127O75204 238 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 SNCAP37840 140 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 RPL27P61353 136 aaKnown RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 SSBP1Q04837 148 aaKnown RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 C1orf189Q5VU69 101 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 LRRC18Q8N456 261 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 FRZBQ92765 325 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 ADAT3Q96EY9 351 aaPredicted RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 FAM71F1Q96KD3 344 aaPredicted RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 HDGFL3Q9Y3E1 203 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 M0R143 59 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 TNFSF14O43557 240 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 CSTBP04080 98 aaKnown RBP12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 HOXB2P14652 356 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 IL12BP29460 328 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 CATSPERDQ86XM0 798 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 OR52N5Q8NH56 324 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 RAB24Q969Q5 203 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 OR5B2Q96R09 309 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 PDE7BQ9NP56 450 aa12.55□□□□□ -0.4
PCDHB3-201ENST00000231130 WDFY3Q8IZQ1 3526 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 H0YL77 283 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 TGOLN2O43493 480 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 CST4P01036 141 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 PET100P0DJ07 73 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 AMY2BP19961 511 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 ASCL1P50553 236 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM33P57088 247 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 PPA1Q15181 289 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 CLEC12BQ2HXU8 276 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 ANKRD55Q3KP44 614 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 NKAIN1Q4KMZ8 207 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM196Q5HYL7 178 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 NCR3LG1Q68D85 454 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 TSLPQ969D9 159 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 RAB39BQ96DA2 213 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 MALSU1Q96EH3 234 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 GALNT14Q96FL9 552 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 SNHG12Q9BXW3 62 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 TPSD1Q9BZJ3 242 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC5A7Q9GZV3 580 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 C5orf66Q9H5L9 145 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 SLC17A5Q9NRA2 495 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 MEGF11A6BM72 1044 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 FOXS1O43638 330 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 CRTAPO75718 401 aaPredicted RBP12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 IAH1Q2TAA2 248 aaPredicted RBP12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 GLIPR1L1Q6UWM5 242 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 C16orf47Q6ZP98 133 aaPredicted RBP12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 SHISA6Q6ZSJ9 500 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 HSF4Q9ULV5 492 aa12.54□□□□□ -0.4
PCDHB3-201ENST00000231130 PRR19A6NJB7 356 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PRAMEF26H0Y7S4 382 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 H3BQ15 152 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 COL9A1P20849 921 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 BCKDHBP21953 392 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PNLIPRP3Q17RR3 467 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM128Q5BJH2 165 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 Q6ZSR6 202 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 AQP3Q92482 292 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 C5orf34Q96MH7 638 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 HIST1H2BLQ99880 126 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 TMEM208Q9BTX3 173 aa12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 ZNF701Q9NV72 531 aaPredicted RBP12.53□□□□□ -0.4
PCDHB3-201ENST00000231130 PLA2G2EQ9NZK7 142 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms