RNA–Protein interactions for RNA: ENST00000005226.11

USH1C-201, Transcript of USH1 protein network component harmonin, humanhuman

APPRIS P3 TSL 5 BASIC

Gene USH1C, Length 2,700 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH1C-201ENST00000005226 PGA3P0DJD8 388 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 FAHP16930 419 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 CPT2P23786 658 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 GABRR1P24046 479 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 RRADP55042 308 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 GPR85P60893 370 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 BRICD5Q6PL45 260 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 SLC38A9Q8NBW4 561 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 STT3BQ8TCJ2 826 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 LYZL4Q96KX0 146 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 IP6K3Q96PC2 410 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 PECRQ9BY49 303 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 PNRC2Q9NPJ4 139 aaKnown RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 MCTS1Q9ULC4 181 aaKnown RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 PQLC2LA1A4F0 135 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 CEACAM18A8MTB9 384 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 C1QL1O75973 258 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 CD5P06127 495 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 ADH6P28332 368 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 TMEM33P57088 247 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 SMAD4Q13485 552 aaKnown RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 C14orf28Q4W4Y0 310 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 THEM4Q5T1C6 240 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 MISPQ8IVT2 679 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 DMBX1Q8NFW5 382 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 SAT2Q96F10 170 aaPredicted RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 ZNF2Q9BSG1 426 aaPredicted RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 URM1Q9BTM9 101 aaKnown RBP12.33□□□□□ -0.44
USH1C-201ENST00000005226 CNTNAP3Q9BZ76 1288 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 FANCFQ9NPI8 374 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 FGF21Q9NSA1 209 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 ALKBH4Q9NXW9 302 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 KLHL13Q9P2N7 655 aa12.33□□□□□ -0.44
USH1C-201ENST00000005226 IGHV1OR21-1A0A087WYE8 117 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 PRSS44E7EML9 344 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 K7EPK0 472 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 FCGR2AP12318 317 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 UBE2V2Q15819 145 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 C5orf46Q6UWT4 87 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 FAM71E2Q8N5Q1 922 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 NOXO1Q8NFA2 376 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 RSRP1Q9BUV0 290 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 TRBV11-1A0A0K0K1C0 115 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 A0A1B0GX78 115 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 OR5H15A6NDH6 313 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 NUDT19A8MXV4 375 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 APOC1P02654 83 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 CSNK1EP49674 416 aaKnown RBP12.32□□□□□ -0.44
USH1C-201ENST00000005226 SULT1A2P50226 295 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 ACTBL2Q562R1 376 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 TSPO2Q5TGU0 170 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 LRRC18Q8N456 261 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 SEMA6DQ8NFY4 1073 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 OR10G3Q8NGC4 313 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 OR14K1Q8NGZ2 314 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 PGAM5Q96HS1 289 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 LIME1Q9H400 295 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 PPP4R1LQ9P1A2 415 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 CACFD1Q9UGQ2 172 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 SDK2Q58EX2 2172 aa12.32□□□□□ -0.44
USH1C-201ENST00000005226 IGHV1OR15-9A0A0B4J2B8 117 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 LINC00587B1AMM8 73 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 FAM157AC9JC47 383 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 MSTNO14793 375 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 XRCC2O43543 280 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 TRAF3IP2O43734 574 aaPredicted RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 DIRAS3O95661 229 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 IGHG1P01857 330 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 OPRM1P35372 400 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 RBMXP38159 391 aaKnown RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 ASCL1P50553 236 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 HGFACQ04756 655 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 TMEM268Q5VZI3 342 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 PPP1R3BQ86XI6 285 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 C20orf196Q8IYI0 205 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 DYRK2Q92630 601 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 MVB12AQ96EY5 273 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 REEP6Q96HR9 211 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 A0A1W2PR77 199 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 A6NLC8 198 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 IFNA2P01563 188 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 HEXAP06865 529 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 DBHP09172 617 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 ZNF44P15621 663 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 ZNF41P51814 821 aaPredicted RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 ZNF616Q08AN1 781 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 TMEM176BQ3YBM2 270 aaPredicted RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 GGNBP1Q5YKI7 109 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 TOMM40LQ969M1 308 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 HIST1H2BAQ96A08 127 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 NUDT16L1Q9BRJ7 211 aaKnown RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 C8orf33Q9H7E9 229 aaPredicted RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 UCK1Q9HA47 277 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 DNAJB11Q9UBS4 358 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 C14orf166Q9Y224 244 aaKnown RBP12.31□□□□□ -0.44
USH1C-201ENST00000005226 RFNGQ9Y644 331 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 FAM221AA4D161 298 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 ANGPTL7O43827 346 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 CST4P01036 141 aa12.31□□□□□ -0.44
USH1C-201ENST00000005226 ZNF806P0C7X5 589 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms