RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 CD163Q86VB7 1156 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 ZFP62Q8NB50 900 aaPredicted RBP13.2□□□□□ -0.3
TRIM3-215ENST00000639856 HAS2Q92819 552 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 CPNE4Q96A23 557 aaPredicted RBP13.2□□□□□ -0.3
TRIM3-215ENST00000639856 FBXO17Q96EF6 278 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 GPER1Q99527 375 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 IFT46Q9NQC8 304 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 V9GYS6 101 aa13.2□□□□□ -0.3
TRIM3-215ENST00000639856 A0A0A6YYD4 124 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 F5H5P2 479 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 M0R135 149 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 M0R233 179 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 NOS1APO75052 506 aaPredicted RBP13.19□□□□□ -0.3
TRIM3-215ENST00000639856 RGS11O94810 467 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 CSN2P05814 226 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 UBBP0CG47 229 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF35P13682 527 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PRF1P14222 555 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF708P17019 499 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 C4BPBP20851 252 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 NFYAP23511 347 aaPredicted RBP13.19□□□□□ -0.3
TRIM3-215ENST00000639856 THBS4P35443 961 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 CXADRP78310 365 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ZMYND11Q15326 602 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 FAM189A2Q15884 450 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 C3AR1Q16581 482 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 NKPD1Q17RQ9 610 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 OR52W1Q6IF63 320 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 Q6ZSR3 168 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF799Q96GE5 643 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 TMEM59Q9BXS4 323 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 KCNK7Q9Y2U2 307 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 DCHS1Q96JQ0 3298 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PROB1E7EW31 1015 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 LINC01387J3KSC0 135 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 SSX5O60225 188 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 IFNA7P01567 189 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 GSTP1P09211 210 aaKnown RBP13.19□□□□□ -0.3
TRIM3-215ENST00000639856 CXCL2P19875 107 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PMP22Q01453 160 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 RTP5Q14D33 572 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 SLC22A6Q4U2R8 563 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 DCAF12L2Q5VW00 463 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 OR8H3Q8N146 312 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 GPR137CQ8N3F9 429 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PNLDC1Q8NA58 520 aaKnown RBP13.19□□□□□ -0.3
TRIM3-215ENST00000639856 C17orf50Q8WW18 174 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ASB13Q8WXK3 278 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PP6455Q8WZ26 134 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 SPTSSAQ969W0 71 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ELMOD3Q96FG2 381 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 ALKBH3Q96Q83 286 aaPredicted RBP13.19□□□□□ -0.3
TRIM3-215ENST00000639856 PLEKHA6Q9Y2H5 1048 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 MYO7BQ6PIF6 2116 aa13.19□□□□□ -0.3
TRIM3-215ENST00000639856 FREM1Q5H8C1 2179 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 MCRIP1C9JLW8 97 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 SOCS1O15524 211 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CYTIPO60759 359 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 DBHP09172 617 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 TBPP20226 339 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 TNFSF10P50591 281 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 EXOSC2Q13868 293 aaKnown RBP13.18□□□□□ -0.3
TRIM3-215ENST00000639856 OPCMLQ14982 345 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 KISS1Q15726 138 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 DEFB109BQ30KR1 87 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 C11orf88Q6PI97 169 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 AAED1Q7RTV5 226 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 RTN4RL2Q86UN3 420 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 C12orf45Q8N5I9 185 aaPredicted RBP13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CCDC54Q8NEL0 328 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 C10orf35Q96D05 121 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 RAB3CQ96E17 227 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CITED4Q96RK1 184 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 DEFB127Q9H1M4 99 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 BANF2Q9H503 90 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CRLF2Q9HC73 371 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 A0A1W2PP11 408 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 HMSDA8MTL9 139 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 L7N2F9 121 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 MTRF1O75570 445 aaKnown RBP13.18□□□□□ -0.3
TRIM3-215ENST00000639856 HIST1H1DP16402 221 aaKnown RBP13.18□□□□□ -0.3
TRIM3-215ENST00000639856 HRH1P35367 487 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 ALDH3B1P43353 468 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 PLAC9Q5JTB6 97 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CRIP3Q6Q6R5 217 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 URM1Q9BTM9 101 aaKnown RBP13.18□□□□□ -0.3
TRIM3-215ENST00000639856 CHST5Q9GZS9 411 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 ZNF224Q9NZL3 707 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 GHRLQ9UBU3 117 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 VSIG4Q9Y279 399 aa13.18□□□□□ -0.3
TRIM3-215ENST00000639856 LAMA5O15230 3695 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 SGCEO43556 437 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 CRTAPO75718 401 aaPredicted RBP13.17□□□□□ -0.3
TRIM3-215ENST00000639856 CST2P09228 141 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 FAHP16930 419 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 CRYGSP22914 178 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 HOXD11P31277 338 aaPredicted RBP13.17□□□□□ -0.3
TRIM3-215ENST00000639856 PTGFRP43088 359 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 TMEM50BP56557 158 aa13.17□□□□□ -0.3
TRIM3-215ENST00000639856 SEC61A1P61619 476 aaKnown RBP13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms