RNA–Protein interactions for RNA: ENST00000637325.1

PNKP-228, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 100 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-228ENST00000637325 PPIAL4GP0DN37 164 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ATP6V1E1P36543 226 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 POLR2IP36954 125 aaKnown RBP11.49□□□□□ -0.57
PNKP-228ENST00000637325 GMFBP60983 142 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ACTG1P63261 375 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 PAX2Q02962 417 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 RIPPLY1Q0D2K3 151 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 KPNB1Q14974 876 aaKnown RBP11.49□□□□□ -0.57
PNKP-228ENST00000637325 TEX36Q5VZQ5 186 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ZFP1Q6P2D0 407 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 WDR82Q6UXN9 313 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ZNF841Q6ZN19 808 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 FAM90A1Q86YD7 464 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 C10orf67Q8IYJ2 551 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 OR51G2Q8NGK0 314 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 OR5P3Q8WZ94 311 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 RPL3LQ92901 407 aaKnown RBP11.49□□□□□ -0.57
PNKP-228ENST00000637325 ITPKCQ96DU7 683 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 FAM71F1Q96KD3 344 aaPredicted RBP11.49□□□□□ -0.57
PNKP-228ENST00000637325 APOL4Q9BPW4 351 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 GABARAPL3Q9BY60 117 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 RASSF4Q9H2L5 321 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ADGRL4Q9HBW9 690 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 GPR84Q9NQS5 396 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 CLN6Q9NWW5 311 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 HAO2Q9NYQ3 351 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 CTSZQ9UBR2 303 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 ZNF69Q9UC07 566 aa11.49□□□□□ -0.57
PNKP-228ENST00000637325 IGHV3OR16-10A0A075B7F0 116 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 PRR32B1ATL7 298 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 LOC110117498-PIK3R3F6TDL0 507 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 EBAG9O00559 213 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 TMPRSS2O15393 492 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 MTRF1O75570 445 aaKnown RBP11.48□□□□□ -0.57
PNKP-228ENST00000637325 ATP6V1B1P15313 513 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 MUC1P15941 1255 aaPredicted RBP11.48□□□□□ -0.57
PNKP-228ENST00000637325 CDC42P60953 191 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 EGR3Q06889 387 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 KLF17Q5JT82 389 aaPredicted RBP11.48□□□□□ -0.57
PNKP-228ENST00000637325 BCL2L15Q5TBC7 163 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 C12orf54Q6X4T0 127 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 MOB3CQ70IA8 216 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 SIGLECL1Q8N7X8 197 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 OR8J1Q8NGP2 316 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 OR10Z1Q8NGY1 313 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 OR51E1Q8TCB6 317 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 FAM216AQ8WUB2 273 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 ITFG2Q969R8 447 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 UPRTQ96BW1 309 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 TBX5Q99593 518 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 MOB1AQ9H8S9 216 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 DNAJB11Q9UBS4 358 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 NUFIP1Q9UHK0 495 aaKnown RBP11.48□□□□□ -0.57
PNKP-228ENST00000637325 PIGLQ9Y2B2 252 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 R4GMQ9 66 aa11.48□□□□□ -0.57
PNKP-228ENST00000637325 ZNF732B4DXR9 585 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 C22orf46C9J442 243 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 HAX1O00165 279 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 DVL1O14640 695 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 TNFRSF13BO14836 293 aaPredicted RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 MAGEB4O15481 346 aaPredicted RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 KRT8P05787 483 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 LIPFP07098 398 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 IGHV4-38-2P0DP08 117 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 HTR1FP30939 366 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 GPM6AP51674 278 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 FGF12P61328 243 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 MFGE8Q08431 387 aaPredicted RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 CEP78Q5JTW2 689 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 SLC36A1Q7Z2H8 476 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 BCL6BQ8N143 479 aaPredicted RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 YIPF7Q8N8F6 280 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 PNLDC1Q8NA58 520 aaKnown RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 SCCPDHQ8NBX0 429 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 OR10H4Q8NGA5 316 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 ST8SIA4Q92187 359 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 GCDHQ92947 438 aaPredicted RBP11.47□□□□□ -0.57
PNKP-228ENST00000637325 RFKQ969G6 155 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 PPP1R14AQ96A00 147 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 CCL13Q99616 98 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 PCGF1Q9BSM1 259 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 TLNRD1Q9H1K6 362 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 IMPAD1Q9NX62 359 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 ENPP5Q9UJA9 477 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 OR52A1Q9UKL2 312 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 SNX5Q9Y5X3 404 aa11.47□□□□□ -0.57
PNKP-228ENST00000637325 TRAV40A0A0B4J280 105 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 SRRM5B3KS81 715 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 DHRS3O75911 302 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 RPP14O95059 124 aaKnown RBP11.46□□□□□ -0.57
PNKP-228ENST00000637325 ECDO95905 644 aaPredicted RBP11.46□□□□□ -0.57
PNKP-228ENST00000637325 OR2T7P0C7T2 308 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 CFHR2P36980 270 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 MTNR1AP48039 350 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 GNG3P63215 75 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 BAMBIQ13145 260 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 CEACAM21Q3KPI0 293 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 WDR38Q5JTN6 314 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 ZBTB37Q5TC79 503 aa11.46□□□□□ -0.57
PNKP-228ENST00000637325 GPR157Q5UAW9 335 aa11.46□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms