RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 EXOSC1Q9Y3B2 195 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-209ENST00000634889 RRP15Q9Y3B9 282 aaKnown RBP12.42□□□□□ -0.42
CDC42BPB-209ENST00000634889 IGHV3-64DA0A0J9YX35 117 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 ISPDA4D126 451 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 SYT7O43581 403 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 GRPP07492 148 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 RPSAP08865 295 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 FAHP16930 419 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 IL2RGP31785 369 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 MDH2P40926 338 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 PMELP40967 661 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 KIR3DL2P43630 455 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 CDH15P55291 814 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 LMO4P61968 165 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 ZNF154Q13106 437 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 CEACAM21Q3KPI0 293 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 TMEM244Q5VVB8 128 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 TMEM42Q69YG0 159 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 LRRC28Q86X40 367 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 MUC20Q8N307 709 aaPredicted RBP12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 SPICQ8N5J4 248 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 OR1M1Q8NGA1 313 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 HPSE2Q8WWQ2 592 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 GGHQ92820 318 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 C10orf35Q96D05 121 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 RAB39BQ96DA2 213 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 HIST1H2AAQ96QV6 131 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 GAL3ST1Q99999 423 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 TLNRD1Q9H1K6 362 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 PPP1R3EQ9H7J1 279 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 ISG20L2Q9H9L3 353 aaKnown RBP12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 UFSP2Q9NUQ7 469 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 RNF7Q9UBF6 113 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 PSORS1C1Q9UIG5 152 aa12.41□□□□□ -0.42
CDC42BPB-209ENST00000634889 TEP1Q99973 2627 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 LOC107986453A0A1B0GWG9 222 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 OR5B21A6NL26 309 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 A6NLC8 198 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 XPNPEP2O43895 674 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 CYB5R3P00387 301 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 NRASP01111 189 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 MYF6P23409 242 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 VHLP40337 213 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 TGM4P49221 684 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ETV1P50549 477 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 GBX2P52951 348 aaPredicted RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 NANOS3P60323 173 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ST3GAL4Q11206 333 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ALKBH1Q13686 389 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ZMYND11Q15326 602 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ODF4Q2M2E3 257 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 CCDC58Q4VC31 144 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 FAM76BQ5HYJ3 339 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 CLVS2Q5SYC1 327 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 WDR86Q86TI4 376 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 KLHL36Q8N4N3 616 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 MSI2Q96DH6 328 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 ZNF665Q9H7R5 613 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 PLEKHA1Q9HB21 404 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 C1orf123Q9NWV4 160 aa12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 CHCHD3Q9NX63 227 aaKnown RBP12.4□□□□□ -0.42
CDC42BPB-209ENST00000634889 TMEM212A6NML5 194 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 OR4C45A6NMZ5 311 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 B4DSR2 109 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 IGHV2-5P01817 119 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 CCDC159P0C7I6 412 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 ZNF16P17020 682 aaPredicted RBP12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 CPT2P23786 658 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 THBS2P35442 1172 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 CFHR2P36980 270 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 GNG3P63215 75 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 HNRNPA0Q13151 305 aaKnown RBP12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 C6orf141Q5SZD1 244 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 PLCXD3Q63HM9 321 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 AHSA2Q719I0 299 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 LINC01356Q8N9X3 169 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 BPIFB6Q8NFQ5 453 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 OR5A2Q8NGI9 324 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 OR52N1Q8NH53 320 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 RNF170Q96K19 258 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 TECTBQ96PL2 329 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 TRIM36Q9NQ86 728 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 FKBP14Q9NWM8 211 aa12.39□□□□□ -0.43
CDC42BPB-209ENST00000634889 PPIAL4EA0A075B759 164 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 hCG_1807616A0A1W2PRN6 198 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 ANKRD61A6NGH8 418 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 PPIAL4DF5H284 164 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 SLC1A7O00341 560 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 PPIAL4FP0DN26 164 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 RBMXP38159 391 aaKnown RBP12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 GPM6AP51674 278 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 KCNJ8Q15842 424 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 ZNF404Q494X3 552 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 CEP78Q5JTW2 689 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 OR2G6Q5TZ20 316 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 FAM166AQ6J272 317 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 KCTD8Q6ZWB6 473 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 MOB3CQ70IA8 216 aa12.38□□□□□ -0.43
CDC42BPB-209ENST00000634889 Q71RC1 249 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms