RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 FABP7O15540 132 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 CREBL2O60519 120 aaPredicted RBP19.19■□□□□ 0.66
PNKP-220ENST00000627232 ZNF735P0CB33 412 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 HIST1H1DP16402 221 aaKnown RBP19.19■□□□□ 0.66
PNKP-220ENST00000627232 GNB3P16520 340 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 CXCL3P19876 107 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 TBPP20226 339 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 ARR3P36575 388 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 ZMYND11Q15326 602 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 OR8B8Q15620 311 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 SLC22A6Q4U2R8 563 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 CLVS2Q5SYC1 327 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 NCCRP1Q6ZVX7 275 aaPredicted RBP19.19■□□□□ 0.66
PNKP-220ENST00000627232 CPEB3Q8NE35 698 aaKnown RBP19.19■□□□□ 0.66
PNKP-220ENST00000627232 NPRL2Q8WTW4 380 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 PIGTQ969N2 578 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 MS4A3Q96HJ5 214 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 S100A13Q99584 98 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 SEC22CQ9BRL7 303 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 ALX4Q9H161 411 aaPredicted RBP19.19■□□□□ 0.66
PNKP-220ENST00000627232 BANF2Q9H503 90 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP19.19■□□□□ 0.66
PNKP-220ENST00000627232 GPR173Q9NS66 373 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 SCP2D1Q9UJQ7 156 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 ITGB1BP2Q9UKP3 347 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 CSAG2Q9Y5P2 127 aa19.19■□□□□ 0.66
PNKP-220ENST00000627232 DISC1C4P0D8 188 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 CEACAM4O75871 244 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 AMY2AP04746 511 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 AGTR1P30556 359 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 FAM3AP98173 230 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 CLN3Q13286 438 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 RSPO4Q2I0M5 234 aaPredicted RBP19.18■□□□□ 0.66
PNKP-220ENST00000627232 TMEM53Q6P2H8 277 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 TECTBQ96PL2 329 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 TM2D1Q9BX74 207 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 TINAGL1Q9GZM7 467 aaPredicted RBP19.18■□□□□ 0.66
PNKP-220ENST00000627232 IFT46Q9NQC8 304 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 SLC2A8Q9NY64 477 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 ANAPC10Q9UM13 185 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 DNAJC13O75165 2243 aa19.18■□□□□ 0.66
PNKP-220ENST00000627232 SOCS1O15524 211 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 FOXG1P55316 489 aaPredicted RBP19.17■□□□□ 0.66
PNKP-220ENST00000627232 GNG2P59768 71 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 ZP1P60852 638 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 LHFPL2Q6ZUX7 228 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 BPIFB2Q8N4F0 458 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 NUDCD2Q8WVJ2 157 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 MYOZ1Q9NP98 299 aaPredicted RBP19.17■□□□□ 0.66
PNKP-220ENST00000627232 CFAP54Q96N23 3096 aa19.17■□□□□ 0.66
PNKP-220ENST00000627232 A0A096LPE4 126 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 A0A1W2PPZ6 126 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 M0QYG6 137 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 SSX5O60225 188 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 NRASP01111 189 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 RLN1P04808 185 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 FCER2P06734 321 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 VSIG10L2P0DP72 767 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 EDN3P14138 238 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 MGMTP16455 207 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 NAT1P18440 290 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 TMEM50BP56557 158 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 PMP22Q01453 160 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 ZNF92Q03936 586 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 CAMK2BQ13554 666 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 ARL6IP1Q15041 203 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 RNASE10Q5GAN6 216 aaKnown RBP19.16■□□□□ 0.66
PNKP-220ENST00000627232 PLAC9Q5JTB6 97 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 C9orf135Q5VTT2 229 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 C1QL2Q7Z5L3 287 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 OR51T1Q8NGJ9 327 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 PRRT1Q99946 306 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 ZNF436Q9C0F3 470 aaPredicted RBP19.16■□□□□ 0.66
PNKP-220ENST00000627232 SLA2Q9H6Q3 261 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 GLRX2Q9NS18 164 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 DLL3Q9NYJ7 618 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 ZNF69Q9UC07 566 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 PLEKHA6Q9Y2H5 1048 aa19.16■□□□□ 0.66
PNKP-220ENST00000627232 A0A1W2PP11 408 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 UBE2QL1A1L167 161 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 FOXI3A8MTJ6 420 aaPredicted RBP19.15■□□□□ 0.66
PNKP-220ENST00000627232 SMLR1H3BR10 107 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 MFNGO00587 321 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 ATP6V1G1O75348 118 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 MPGP29372 298 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 CBX5P45973 191 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 MTCP1P56278 107 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 IDO2Q6ZQW0 420 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 OR5D18Q8NGL1 313 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 CCDC107Q8WV48 283 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 GMPPAQ96IJ6 420 aaPredicted RBP19.15■□□□□ 0.66
PNKP-220ENST00000627232 TMEM246Q9BRR3 403 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 PLSCR3Q9NRY6 295 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 KCNK7Q9Y2U2 307 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 FREM1Q5H8C1 2179 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 MYO7BQ6PIF6 2116 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 LOC100509620A0A075B734 347 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 HLA-HP01893 362 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 OR3A2P47893 321 aa19.15■□□□□ 0.66
PNKP-220ENST00000627232 SF3B4Q15427 424 aaKnown RBP eCLIP19.15■□□□□ 0.664e-8■■■■□ 20.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms