RNA–Protein interactions for RNA: ENST00000622555.1

PTCHD3-202, Transcript of patched domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene PTCHD3, Length 1,720 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3-202ENST00000622555 PURGQ9UJV8 347 aaKnown RBP15.27■□□□□ 0.04
PTCHD3-202ENST00000622555 RNF115Q9Y4L5 304 aa15.27■□□□□ 0.04
PTCHD3-202ENST00000622555 KLF2Q9Y5W3 355 aaPredicted RBP15.27■□□□□ 0.04
PTCHD3-202ENST00000622555 ROS1P08922 2347 aa15.27■□□□□ 0.03
PTCHD3-202ENST00000622555 ANKRD30BLA7E2S9 258 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 IQCF6A8MYZ5 107 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 TIMM8AO60220 97 aaPredicted RBP15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 GMDSO60547 372 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 NRASP01111 189 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 OXA1LQ15070 435 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 MSMPQ1L6U9 139 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 ALKBH6Q3KRA9 238 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 TMEM42Q69YG0 159 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 NR2C2APQ86WQ0 139 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 DNAAF1Q8NEP3 725 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 NPRL2Q8WTW4 380 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 SLC25A46Q96AG3 418 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 DUSP13Q9UII6 198 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 CMAHPQ9Y471 501 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 ZNF850A8MQ14 1090 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 PRSS44E7EML9 344 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 LILRA1O75019 489 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 CST4P01036 141 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 ZNF250P15622 560 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 ATF1P18846 271 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 KITLGP21583 273 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 BDKRB2P30411 391 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 S100A5P33763 92 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 UBE2V2Q15819 145 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 TMEM255AQ5JRV8 349 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 MEX3BQ6ZN04 569 aaKnown RBP15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 UBASH3BQ8TF42 649 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 PIGTQ969N2 578 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 HS3ST6Q96QI5 342 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 GFI1Q99684 422 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 PPP1R3EQ9H7J1 279 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 TMEM138Q9NPI0 162 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 GPR160Q9UJ42 338 aa15.26■□□□□ 0.03
PTCHD3-202ENST00000622555 IGKV1-9A0A0C4DH69 117 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 MEGF11A6BM72 1044 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 MAGEB3O15480 346 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 ERCC1P07992 297 aaPredicted RBP15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 KLF3P57682 345 aaPredicted RBP15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 PRDX4Q13162 271 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 PLCXD3Q63HM9 321 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 MOB3CQ70IA8 216 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 LRP11Q86VZ4 500 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 MINDY2Q8NBR6 621 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 WDFY2Q96P53 400 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 SYT3Q9BQG1 590 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 ZNF442Q9H7R0 627 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 SMURF1Q9HCE7 757 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 MRPL15Q9P015 296 aaKnown RBP15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 V9GY05 133 aa15.25■□□□□ 0.03
PTCHD3-202ENST00000622555 ABCA4P78363 2273 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 SPTAN1Q13813 2472 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 A0A0G2JK05 382 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 CTDSP2O14595 271 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 PLAUP00749 431 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 HCKP08631 526 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 LOXP28300 417 aaPredicted RBP15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 SELENOVP59797 346 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 CNN3Q15417 329 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 DDI2Q5TDH0 399 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 NKAIN3Q8N8D7 197 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 OR52N4Q8NGI2 321 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 TRMT10AQ8TBZ6 339 aaKnown RBP15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 NEUROG1Q92886 237 aa15.24■□□□□ 0.03
PTCHD3-202ENST00000622555 ISPDA4D126 451 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 NOTOA8MTQ0 251 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 UPK1BO75841 260 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 ALX3O95076 343 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 CA6P23280 308 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 AZGP1P25311 298 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 PSMD7P51665 324 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 ZNF181Q2M3W8 571 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 GLT8D1Q68CQ7 371 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 SFXN4Q6P4A7 337 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 KRT74Q7RTS7 529 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 ZDHHC23Q8IYP9 409 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 JAGN1Q8N5M9 183 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 OR8G5Q8NG78 346 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 DVL3Q92997 716 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 MRPL24Q96A35 216 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 TECTBQ96PL2 329 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 MRPL37Q9BZE1 423 aaKnown RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 PLEKHB1Q9UF11 243 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 MPC1Q9Y5U8 109 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 VSTM5A8MXK1 200 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 E7EQL1 145 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 IGHV3-13P01766 116 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 OR4A8P0C604 315 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 PRKACBP22694 351 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 TNFSF8P32971 234 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 ADIPOQQ15848 244 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 SPACA5Q96QH8 159 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 HIST1H2AAQ96QV6 131 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 NKX3-1Q99801 234 aaPredicted RBP15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 TMEM204Q9BSN7 226 aa15.23■□□□□ 0.03
PTCHD3-202ENST00000622555 NEK6Q9HC98 313 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms