RNA–Protein interactions for RNA: ENST00000620864.1

COLCA1-205, Transcript of colorectal cancer associated 1, humanhuman

TSL 1 (best) BASIC

Gene COLCA1, Length 8,098 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA1-205ENST00000620864 INPP5JQ15735 1006 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM116Q8NCL8 245 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FGF20Q9NP95 211 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 OBP2AQ9NY56 170 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 MBD1Q9UIS9 605 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CLDN17P56750 224 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 ZXDBP98169 803 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 AQP6Q13520 282 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 IL10RAQ13651 578 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CALHM3Q86XJ0 350 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 PLPP7Q8NBV4 271 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 NUDCD2Q8WVJ2 157 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM40Q8WWA1 233 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 SIGLEC14Q08ET2 396 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 SRSF9Q13242 221 aaKnown RBP eCLIP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TUSC1Q2TAM9 212 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 AFMIDQ63HM1 303 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CGB2Q6NT52 195 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 LCORQ96JN0 433 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CSF3RQ99062 836 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 EMCNQ9ULC0 261 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 MASP2O00187 686 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 AKR7A2O43488 359 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 ACTL6AO96019 429 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FHITP49789 147 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CLDN15P56746 228 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 HLA-DRB5Q30154 266 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 KHDC3LQ587J8 217 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 FAM26DQ5JW98 314 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 WDR89Q96FK6 387 aaPredicted RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TNFRSF13CQ96RJ3 184 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 YAE1D1Q9NRH1 226 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TMED7-TICAM2A0A0A6YYA0 188 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CRYABP02511 175 aaKnown RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 P2RY2P41231 377 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 SUCLG1P53597 346 aaKnown RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 DGCR2P98153 550 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CCDC190Q86UF4 302 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 OR10X1Q8NGY0 326 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TMEM70Q9BUB7 260 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 MRPL13Q9BYD1 178 aaKnown RBP6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CHRNA10Q9GZZ6 450 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CHST8Q9H2A9 424 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 TMED7Q9Y3B3 224 aa6.5□□□□□ -1.37
COLCA1-205ENST00000620864 CITO14578 2027 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 DNAJC25-GNG10A0A024R161 153 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF840PA6NDX5 716 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 NEURL1O76050 574 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 F13BP05160 661 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SLC35E2P0CK97 266 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ADRA1AP35348 466 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SSR4P51571 173 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 FOXA1P55317 472 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LEMD1Q68G75 181 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 OR8D4Q8NGM9 314 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 OR51H1Q8NH63 302 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TEAD3Q99594 435 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 BANF2Q9H503 90 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PRDM7Q9NQW5 492 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF107Q9UII5 783 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TCF20Q9UGU0 1960 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ZAR1LA6NP61 321 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 FRS3O43559 492 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 NDUFB6O95139 128 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 FGF2P09038 288 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 HIST1H1CP16403 213 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TEAD1P28347 426 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ANKRD33Q7Z3H0 272 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 RTN4IP1Q8WWV3 396 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 IGSF8Q969P0 613 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 C19orf43Q9BQ61 176 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PLA2G12AQ9BZM1 189 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LYRM4Q9HD34 91 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LOC107986453A0A1B0GWG9 222 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 IGSF23A1L1A6 192 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ANKRD61A6NGH8 418 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 MT-ND6P03923 174 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ACAA1P09110 424 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SRFP11831 508 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 CD96P40200 585 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 MDH2P40926 338 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PRDX1Q06830 199 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 TRIP6Q15654 476 aaKnown RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SYPL1Q16563 259 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ABHD17CQ6PCB6 329 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LILRA2Q8N149 483 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LRRC18Q8N456 261 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 LILRB1Q8NHL6 650 aaPredicted RBP6.49□□□□□ -1.37
COLCA1-205ENST00000620864 PERPQ96FX8 193 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 FAM234AQ9H0X4 552 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 CHST11Q9NPF2 352 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SPANXA1Q9NS26 97 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 STARD5Q9NSY2 213 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 ZNF716A6NP11 495 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 DOK2O60496 412 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 SCRG1O75711 98 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 EPHA2P29317 976 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 HRH1P35367 487 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 METAP1P53582 386 aa6.49□□□□□ -1.37
COLCA1-205ENST00000620864 B2MP61769 119 aa6.49□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms