RNA–Protein interactions for RNA: ENST00000620786.4

CLIP1-219, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CLIP1, Length 5,913 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-219ENST00000620786 FAM58AQ8N1B3 248 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 MFSD4AQ8N468 514 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR8B3Q8NGG8 313 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 SLC7A6Q92536 515 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 C4orf45Q96LM5 186 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR8B2Q96RD0 313 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 DHRS9Q9BPW9 319 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 C3orf80F5H4A9 247 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ACTL6AO96019 429 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ASCL1P50553 236 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 TMUB2Q71RG4 321 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR6S1Q8NH40 331 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 SP7Q8TDD2 431 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 MBD1Q9UIS9 605 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 NUPL2O15504 423 aaKnown RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR13C7P0DN81 318 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 JUNBP17275 347 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 FABP5Q01469 135 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR5I1Q13606 314 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 TSPAN32Q96QS1 320 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR8B4Q96RC9 309 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 NUMA1Q14980 2115 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 A0A1W2PRD5 423 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 A0A1W2PRF3 423 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 A0A1W2PRM7 423 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 GPX5O75715 221 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ZBTB25P24278 435 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 S100A11P31949 105 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 PMS2CLQ68D20 193 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 FAAP20Q6NZ36 180 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 NUFIP2Q7Z417 695 aaKnown RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 TMEM179BQ7Z7N9 219 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 RIMKLAQ8IXN7 391 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ZFP62Q8NB50 900 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 MISP3Q96FF7 219 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 BTF3L4Q96K17 158 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ACTR3CQ9C0K3 210 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 CACFD1Q9UGQ2 172 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 CYTIPO60759 359 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 CT62P0C5K7 136 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 TAGLN2P37802 199 aaKnown RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 CEACAM6P40199 344 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 LYG1Q8N1E2 194 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OR5D13Q8NGL4 314 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 UBALD1Q8TB05 177 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 SPSB1Q96BD6 273 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 RASL10BQ96S79 203 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 OCEL1Q9H607 264 aa10.17□□□□□ -0.78
CLIP1-219ENST00000620786 ZNF331Q9NQX6 463 aaPredicted RBP10.17□□□□□ -0.78
CLIP1-219ENST00000620786 GFRA3O60609 400 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 RAB5CP51148 216 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 VN1R4Q7Z5H5 301 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 DUS3LQ96G46 650 aaKnown RBP10.16□□□□□ -0.78
CLIP1-219ENST00000620786 MEX3AA1L020 520 aaKnown RBP10.16□□□□□ -0.78
CLIP1-219ENST00000620786 H2AFB1P0C5Y9 115 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 FUT3P21217 361 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 TMPRSS3P57727 454 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 LIMS2Q7Z4I7 341 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 SLC51BQ86UW2 128 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 ARHGEF39Q8N4T4 335 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 TERB2Q8NHR7 220 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 NUBPLQ8TB37 319 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 MARCH1Q8TCQ1 289 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 FAM122AQ96E09 287 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 STRCP1A6NGW2 1772 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 FTH1P19P0C7X4 201 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 TREM2Q9NZC2 230 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 LAMB2P55268 1798 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 ADAM20O43506 726 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 SNRPNP63162 240 aaKnown RBP10.16□□□□□ -0.78
CLIP1-219ENST00000620786 PNLIPRP3Q17RR3 467 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 FAHD1Q6P587 224 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 SPRED2Q7Z698 418 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 GON7Q9BXV9 100 aa10.16□□□□□ -0.78
CLIP1-219ENST00000620786 PLPP3O14495 311 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 CHEK1O14757 476 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 XRCC3O43542 346 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 COX6B1P14854 86 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 SPNS3Q6ZMD2 512 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 TUSC5Q8IXB3 177 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 AKR1E2Q96JD6 320 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 NME2P1O60361 137 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 FGF7P21781 194 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 CEACAM3P40198 252 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 SLC25A1P53007 311 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 TMEM41BQ5BJD5 291 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 FAM219BQ5XKK7 198 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 KCNRGQ8N5I3 272 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 OR4F5Q8NH21 305 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 PCNPQ8WW12 178 aaKnown RBP10.15□□□□□ -0.78
CLIP1-219ENST00000620786 OR4F4Q96R69 305 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 MAGT1Q9H0U3 335 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 OR5V1Q9UGF6 321 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 hADV38S2A0JD32 116 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 DHRS3O75911 302 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 TFAP2AP05549 437 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 PATE4P0C8F1 98 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 FAM122CQ6P4D5 195 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 TRAT1Q6PIZ9 186 aa10.15□□□□□ -0.78
CLIP1-219ENST00000620786 FGF11Q92914 225 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms