RNA–Protein interactions for RNA: ENST00000619445.1

UPF3B-204, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5 BASIC

Gene UPF3B, Length 1,385 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-204ENST00000619445 NCR3LG1Q68D85 454 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 KCTD18Q6PI47 426 aaPredicted RBP9.83□□□□□ -0.84
UPF3B-204ENST00000619445 DEGS2Q6QHC5 323 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 VMO1Q7Z5L0 202 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 C11orf53Q8IXP5 236 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 DTX3Q8N9I9 347 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 OR5R1Q8NH85 324 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 DNAJC9Q8WXX5 260 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 CCL13Q99616 98 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 CITED1Q99966 193 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 C1orf21Q9H246 121 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 RASSF4Q9H2L5 321 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 DNAJC27Q9NZQ0 273 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 ONECUT1Q9UBC0 465 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 BOLA1Q9Y3E2 137 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 RHBDD3Q9Y3P4 386 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 RNF114Q9Y508 228 aa9.83□□□□□ -0.84
UPF3B-204ENST00000619445 TGP01266 2768 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 VWFP04275 2813 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 IGHV3OR15-7A0A075B7D8 119 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 FAM183AA6NL82 134 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 AQP12BA6NM10 295 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 M0R1W7 72 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 CDIPTO14735 213 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 MAP2K3P46734 347 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 TGM4P49221 684 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 CAV3P56539 151 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 PSMA6P60900 246 aaKnown RBP9.82□□□□□ -0.84
UPF3B-204ENST00000619445 ACSM1Q08AH1 577 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 PPP1R8Q12972 351 aaKnown RBP9.82□□□□□ -0.84
UPF3B-204ENST00000619445 PRDX4Q13162 271 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 STUMQ69YW2 141 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 WDR86Q86TI4 376 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 AQP12AQ8IXF9 295 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 FAM81AQ8TBF8 368 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 THEM6Q8WUY1 208 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 OR5P3Q8WZ94 311 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 RAB3IPQ96QF0 476 aaPredicted RBP9.82□□□□□ -0.84
UPF3B-204ENST00000619445 CCT8L2Q96SF2 557 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 NIPSNAP1Q9BPW8 284 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 DCTN5Q9BTE1 182 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 CHID1Q9BWS9 393 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 OR51V1Q9H2C8 321 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 MMP27Q9H306 513 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 METTL8Q9H825 291 aaKnown RBP9.82□□□□□ -0.84
UPF3B-204ENST00000619445 BRD7Q9NPI1 651 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 TNFRSF19Q9NS68 423 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 VNN3Q9NY84 501 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 TMEM14AQ9Y6G1 99 aa9.82□□□□□ -0.84
UPF3B-204ENST00000619445 TRBV23-1A0A0A0MS06 115 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 A0A0U1RQK1 487 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 A0A0U1RQV5 110 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ZNF816-ZNF321PA0A0X1KG74 233 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP9.81□□□□□ -0.84
UPF3B-204ENST00000619445 E2F6O75461 281 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 CLPXO76031 633 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 PAHP00439 452 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 IGHV4-59P01825 116 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 OSMP13725 252 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ANXA8P13928 327 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 POU1F1P28069 291 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 DCTDP32321 178 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 TGFBR2P37173 567 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 GNG3P63215 75 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 CSNK2BP67870 215 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 PDLIM3Q53GG5 364 aaPredicted RBP9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ZBTB37Q5TC79 503 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 DHRS7BQ6IAN0 325 aaPredicted RBP9.81□□□□□ -0.84
UPF3B-204ENST00000619445 KCTD8Q6ZWB6 473 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 KRT74Q7RTS7 529 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ZDHHC23Q8IYP9 409 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 OR5D13Q8NGL4 314 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ZNF671Q8TAW3 534 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 RNF170Q96K19 258 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 PKP2Q99959 881 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 PRRG3Q9BZD7 231 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 YIPF3Q9GZM5 350 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 MED20Q9H944 212 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 ZNRD1Q9P1U0 126 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 SLC25A10Q9UBX3 287 aaPredicted RBP9.81□□□□□ -0.84
UPF3B-204ENST00000619445 LAMP5Q9UJQ1 280 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 VPREB3Q9UKI3 123 aa9.81□□□□□ -0.84
UPF3B-204ENST00000619445 A0A1W2PPH5 198 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 OR5B21A6NL26 309 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 ZNF850A8MQ14 1090 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 ACOT8O14734 319 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 SIGLEC5O15389 551 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 ZNF254O75437 659 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 FAM107AO95990 144 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 ANOS1P23352 680 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 UBE2E1P51965 193 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 RPS7P62081 194 aaKnown RBP9.8□□□□□ -0.84
UPF3B-204ENST00000619445 HOXA4Q00056 320 aaPredicted RBP9.8□□□□□ -0.84
UPF3B-204ENST00000619445 RELBQ01201 579 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 MS4A2Q01362 244 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 DEFA6Q01524 100 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 POU4F2Q12837 409 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 IKZF1Q13422 519 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 GINS1Q14691 196 aa9.8□□□□□ -0.84
UPF3B-204ENST00000619445 KLHL12Q53G59 568 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms