RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 DHRS7CA6NNS2 312 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 TRDCB7Z8K6 153 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 SHISA8B8ZZ34 492 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 C11orf98E9PRG8 122 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 GPANK1O95872 356 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 ONECUT2O95948 504 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 CYC1P08574 325 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 MELTFP08582 738 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 MC5RP33032 325 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 CDK5Q00535 292 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 CRMP1Q14194 572 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 OR7A5Q15622 319 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 GUK1Q16774 197 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 TRIM61Q5EBN2 209 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 ELFN2Q5R3F8 820 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 C1QL3Q5VWW1 255 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 UNQ9370/PRO34162Q6UXP9 181 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 HEPN1Q6WQI6 88 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 MARCH3Q86UD3 253 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 SPEM1Q8N4L4 309 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 TMEM99Q8N816 258 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 OR52L1Q8NGH7 329 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 OR52E2Q8NGJ4 325 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 OR13C5Q8NGS8 318 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 ZPLD1Q8TCW7 415 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 RASD2Q96D21 266 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 SHDQ96IW2 340 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 FAM71F1Q96KD3 344 aaPredicted RBP4.96□□□□□ -1.62
CPNE4-214ENST00000617767 JSRP1Q96MG2 331 aaPredicted RBP4.96□□□□□ -1.62
CPNE4-214ENST00000617767 TMEM56Q96MV1 263 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 VSTM2LQ96N03 204 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 INTS14Q96SY0 518 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 SULT4A1Q9BR01 284 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 CHODLQ9H9P2 273 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 KRCC1Q9NPI7 259 aaPredicted RBP4.96□□□□□ -1.62
CPNE4-214ENST00000617767 MED31Q9Y3C7 131 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 PPIAL4AQ9Y536 164 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 TMEM56-RWDD3S4R434 201 aa4.96□□□□□ -1.62
CPNE4-214ENST00000617767 PCNX2A6NKB5 2137 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 DUX1O43812 170 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 RAB36O95755 333 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 IGLV3-19P01714 112 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 CST2P09228 141 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 CPEP16870 476 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 PSMB6P28072 239 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 HTR2CP28335 458 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 APOBEC3AP31941 199 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 PGGHGQ32M88 737 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 C4orf17Q53FE4 359 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SLC22A10Q63ZE4 541 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ZNF626Q68DY1 528 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SLC35G3Q8N808 338 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 PNLDC1Q8NA58 520 aaKnown RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ST6GALNAC3Q8NDV1 305 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 OR5L2Q8NGL0 311 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 M1APQ8TC57 530 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 PTPMT1Q8WUK0 201 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SECTM1Q8WVN6 248 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SPRYD4Q8WW59 207 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ADIPOR1Q96A54 375 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 OR2J1Q9GZK6 312 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 COMMD4Q9H0A8 199 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SLC25A31Q9H0C2 315 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 GPN1Q9HCN4 374 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 RNF150Q9ULK6 438 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 RCE1Q9Y256 329 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 EXOSC1Q9Y3B2 195 aaKnown RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 CLDN16Q9Y5I7 305 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 TIMM10BQ9Y5J6 103 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 V9GYS6 101 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 A0A087WV48 116 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ANKUB1A6NFN9 424 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SLC22A31A6NKX4 558 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SERPINE3A8MV23 424 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 J3QLW9 94 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 K7ESF4 209 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 DVL1O14640 695 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 FGF16O43320 207 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 BCL2L11O43521 198 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 MPZL2O60487 215 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SRPX2O60687 465 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ZNF19P17023 458 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 FBLP22087 321 aaKnown RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 GLRA1P23415 457 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 RBMS1P29558 406 aaKnown RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ARRB1P49407 418 aaPredicted RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 SELENOVP59797 346 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 HTD2P86397 168 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 PAX5Q02548 391 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 TPBGQ13641 420 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 RAB35Q15286 201 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 UBE2V2Q15819 145 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 LRRC37A5PQ49AS3 106 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 EIPR1Q53HC9 387 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 LDLRAD2Q5SZI1 272 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 LYSMD4Q5XG99 296 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ARL9Q6T311 187 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 NUFIP2Q7Z417 695 aaKnown RBP4.95□□□□□ -1.62
CPNE4-214ENST00000617767 ZNF100Q8IYN0 542 aa4.95□□□□□ -1.62
CPNE4-214ENST00000617767 IZUMO1Q8IYV9 350 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms