RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 BTNL3Q6UXE8 466 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 D2HGDHQ8N465 521 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 RTN4IP1Q8WWV3 396 aaPredicted RBP18.05■□□□□ 0.48
CTDP1-208ENST00000613122 TIMM9Q9Y5J7 89 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 KRBOX1C9JBD0 128 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 FXYD1O00168 92 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 COX7A2P2O60397 106 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 OR2T6Q8NHC8 308 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 CLDN23Q96B33 292 aa18.05■□□□□ 0.48
CTDP1-208ENST00000613122 PARP12Q9H0J9 701 aaKnown RBP18.05■□□□□ 0.48
CTDP1-208ENST00000613122 OR5H14A6NHG9 310 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 OR5H1A6NKK0 313 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 E5RGE8 158 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 NGFP01138 241 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 SFTPCP11686 197 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 PCNPQ8WW12 178 aaKnown RBP18.04■□□□□ 0.48
CTDP1-208ENST00000613122 RAB1CQ92928 201 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 NSG2Q9Y328 171 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 BCORQ6W2J9 1755 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 SNRPNP63162 240 aaKnown RBP18.04■□□□□ 0.48
CTDP1-208ENST00000613122 ARID1BQ8NFD5 2236 aaPredicted RBP18.04■□□□□ 0.48
CTDP1-208ENST00000613122 EPPINO95925 133 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 KIR2DL1P43626 348 aaPredicted RBP18.04■□□□□ 0.48
CTDP1-208ENST00000613122 ASAH1Q13510 395 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 FAAP20Q6NZ36 180 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 TCEAL7Q9BRU2 100 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 IL20Q9NYY1 176 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 TRAV1-2A0A0B4J238 106 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 IGHV5-10-1A0A0J9YXX1 117 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 ZNF724A8MTY0 619 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 MBP02144 154 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 PRR35P0CG20 571 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 CTRB1P17538 263 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 CTRB2Q6GPI1 263 aa18.04■□□□□ 0.48
CTDP1-208ENST00000613122 NDUFA6P56556 154 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 TLE1Q04724 770 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 OR4Q3Q8NH05 313 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 LRRC29Q8WV35 223 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SERTM1A2A2V5 107 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 H0Y8G0 127 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 TMEM127O75204 238 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 P2RX3P56373 397 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 ZIC1Q15915 447 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 DHRS3O75911 302 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 UCNP55089 124 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 ZNF141Q15928 474 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SP7Q8TDD2 431 aaPredicted RBP18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SCARB1Q8WTV0 552 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 MARC2Q969Z3 335 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 MOB1BQ7L9L4 216 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 CMBLQ96DG6 245 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 TSPAN32Q96QS1 320 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 RASL10BQ96S79 203 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 CHST6Q9GZX3 395 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 GAL3ST2Q9H3Q3 398 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SLC17A2O00624 439 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 OR2F2O95006 317 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 GOSR1O95249 250 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SLC25A6P12236 298 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 OR2F1Q13607 317 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 SKA3Q8IX90 412 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 EID2BQ96D98 161 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 C12orf10Q9HB07 376 aa18.03■□□□□ 0.48
CTDP1-208ENST00000613122 PSMB6P28072 239 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 PLPPR2Q96GM1 343 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 PLEKHA2Q9HB19 425 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 ARAP2Q8WZ64 1704 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 TTC3P53804 2025 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 GPR31O00270 319 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 ACTL6AO96019 429 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 CT62P0C5K7 136 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 TIGITQ495A1 244 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 SLC6A13Q9NSD5 602 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 H3BMH7 237 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 ZNF354AO60765 605 aaPredicted RBP18.02■□□□□ 0.48
CTDP1-208ENST00000613122 COX5AP20674 150 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 TRAT1Q6PIZ9 186 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 OR4S1Q8NGB4 309 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 OR5D13Q8NGL4 314 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 ZNF835Q9Y2P0 537 aa18.02■□□□□ 0.48
CTDP1-208ENST00000613122 XKRY2A2RUG3 117 aa18.02■□□□□ 0.47
CTDP1-208ENST00000613122 CYTIPO60759 359 aa18.02■□□□□ 0.47
CTDP1-208ENST00000613122 OR4E1P0C645 316 aa18.02■□□□□ 0.47
CTDP1-208ENST00000613122 RPL12P30050 165 aaKnown RBP18.02■□□□□ 0.47
CTDP1-208ENST00000613122 SSBP1Q04837 148 aaKnown RBP18.02■□□□□ 0.47
CTDP1-208ENST00000613122 LCN15Q6UWW0 184 aa18.02■□□□□ 0.47
CTDP1-208ENST00000613122 C20orf141Q9NUB4 165 aa18.02■□□□□ 0.47
CTDP1-208ENST00000613122 AMMECR1Q9Y4X0 333 aaPredicted RBP18.02■□□□□ 0.47
CTDP1-208ENST00000613122 EPXP11678 715 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 C12orf73Q69YU5 71 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 RNF24Q9Y225 148 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 PLPP3O14495 311 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 NME2P1O60361 137 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 MAGEA5P43359 124 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 WNT3P56703 355 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 RAC3P60763 192 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 ACY3Q96HD9 319 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 TMEM56Q96MV1 263 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 MAGT1Q9H0U3 335 aa18.01■□□□□ 0.47
CTDP1-208ENST00000613122 FBXO34Q9NWN3 711 aa18.01■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms