RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 PNLIPP16233 465 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 TBPP20226 339 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 FCGR2CP31995 323 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 RAB1AP62820 205 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 DHRS2Q13268 280 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 RAB35Q15286 201 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 FAM74A1Q5RGS3 127 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 ZBTB37Q5TC79 503 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 BRICD5Q6PL45 260 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 OR4D6Q8NGJ1 314 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 OR51H1Q8NH63 302 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 ZNF385AQ96PM9 386 aaKnown RBP11.66□□□□□ -0.54
TCF3-220ENST00000611869 SDHCQ99643 169 aaPredicted RBP11.66□□□□□ -0.54
TCF3-220ENST00000611869 GHRLQ9UBU3 117 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 PIGBOS1A0A0B4J2F0 54 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 GSTZ1O43708 216 aaPredicted RBP11.66□□□□□ -0.54
TCF3-220ENST00000611869 UPK3AO75631 287 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 CCL2P13500 99 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 HIST1H1DP16402 221 aaKnown RBP11.66□□□□□ -0.54
TCF3-220ENST00000611869 HNF4GQ14541 408 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 PLA1AQ53H76 456 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 C19orf48Q6RUI8 117 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 TEX261Q6UWH6 196 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 TMEM200AQ86VY9 491 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 M1APQ8TC57 530 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 U3KQ87 197 aa11.66□□□□□ -0.54
TCF3-220ENST00000611869 ZNF816-ZNF321PA0A0X1KG74 233 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 AQP7P3A6NL99 342 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 HSD17B6O14756 317 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 CTDSPLO15194 276 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 AKR1C1Q04828 323 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 KLF9Q13886 244 aaPredicted RBP11.65□□□□□ -0.54
TCF3-220ENST00000611869 LGI3Q8N145 548 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 OR6K3Q8NGY3 331 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 PARP12Q9H0J9 701 aaKnown RBP11.65□□□□□ -0.54
TCF3-220ENST00000611869 AKIRIN1Q9H9L7 192 aaPredicted RBP11.65□□□□□ -0.54
TCF3-220ENST00000611869 TRIM64BA6NI03 449 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 MMP16P51512 607 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 PABPC1L2AQ5JQF8 200 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 TFAP2EQ6VUC0 442 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 ACOT7LQ6ZUV0 252 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 C6orf201Q7Z4U5 140 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 TMED6Q8WW62 240 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 UBL7Q96S82 380 aaPredicted RBP11.65□□□□□ -0.54
TCF3-220ENST00000611869 SULT4A1Q9BR01 284 aa11.65□□□□□ -0.54
TCF3-220ENST00000611869 OR6C65A6NJZ3 312 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 SLC22A20A6NK97 555 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 DEGS1O15121 323 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 ICMTO60725 284 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 PPP1R1AQ13522 171 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 HES3Q5TGS1 186 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 GCNT2Q8N0V5 402 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 OSR2Q8N2R0 312 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 GALNT16Q8N428 558 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 SEH1LQ96EE3 360 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 ADAT3Q96EY9 351 aaPredicted RBP11.65□□□□□ -0.55
TCF3-220ENST00000611869 FLVCR1Q9Y5Y0 555 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 PI4KAP42356 2102 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 KIF26BQ2KJY2 2108 aa11.65□□□□□ -0.55
TCF3-220ENST00000611869 SPINK2P20155 84 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 RPL23AP62750 156 aaKnown RBP11.64□□□□□ -0.55
TCF3-220ENST00000611869 DEFB109BQ30KR1 87 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 TMEM217Q8N7C4 229 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 OR11H7Q8NGC8 314 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 SNIP1Q8TAD8 396 aaKnown RBP11.64□□□□□ -0.55
TCF3-220ENST00000611869 WDR54Q9H977 334 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 MRPL22Q9NWU5 206 aaKnown RBP11.64□□□□□ -0.55
TCF3-220ENST00000611869 SDHAF2Q9NX18 166 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 SERPINE3A8MV23 424 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 ARR3P36575 388 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 A0A1W2PR80 420 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 OR2F2O95006 317 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 ANKRD34CP0C6C1 535 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 LIFP15018 202 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 M6PRP20645 277 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 OR2F1Q13607 317 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 KRBOX4Q5JUW0 171 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 DPPA2Q7Z7J5 298 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 CHAC2Q8WUX2 184 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 MFRPQ9BY79 579 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 PRELID1Q9Y255 219 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 TTC28Q96AY4 2481 aa11.64□□□□□ -0.55
TCF3-220ENST00000611869 ZNF732B4DXR9 585 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 HLA-DQB1P01920 261 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ZDHHC23Q8IYP9 409 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ZADH2Q8N4Q0 377 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ARRDC1Q8N5I2 433 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 OR56B2PQ8NGI1 322 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 ABHD3Q8WU67 409 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 RNF141Q8WVD5 230 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SPSB1Q96BD6 273 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KIRREL1Q96J84 757 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SPSB2Q99619 263 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 GNG12Q9UBI6 72 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 IGLV1-36A0A0B4J1U3 117 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KIR2DS1A0A191URI9 304 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 KRBOX1C9JBD0 128 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 SOCS1O15524 211 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 CDC14BO60729 498 aa11.63□□□□□ -0.55
TCF3-220ENST00000611869 TUSC2O75896 110 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms