RNA–Protein interactions for RNA: ENST00000606752.1

USP6NL-204, Transcript of USP6 N-terminal like, humanhuman

TSL 1 (best)

Gene USP6NL, Length 1,823 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NL-204ENST00000606752 C11orf54Q9H0W9 315 aaPredicted RBP18.63■□□□□ 0.57
USP6NL-204ENST00000606752 PIGMQ9H3S5 423 aa18.63■□□□□ 0.57
USP6NL-204ENST00000606752 GHRLQ9UBU3 117 aa18.63■□□□□ 0.57
USP6NL-204ENST00000606752 ZNF629Q9UEG4 869 aaPredicted RBP18.63■□□□□ 0.57
USP6NL-204ENST00000606752 AMDHD2Q9Y303 409 aa18.63■□□□□ 0.57
USP6NL-204ENST00000606752 A0A0A6YYH2 397 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 A0A0G2JNJ9 132 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 MED19A0JLT2 244 aaPredicted RBP18.62■□□□□ 0.57
USP6NL-204ENST00000606752 A6NJ64 397 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 TMEM14DPA8MWL7 114 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 GABARAPH6UMI1 98 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 KDM4BO94953 1096 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 AGFG2O95081 481 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 IL32P24001 234 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 ALDH3B1P43353 468 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 UNC119Q13432 240 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 ZNF57Q68EA5 555 aaPredicted RBP18.62■□□□□ 0.57
USP6NL-204ENST00000606752 KRT74Q7RTS7 529 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 OR2W3Q7Z3T1 314 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 PIGCQ92535 297 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 CPNE2Q96FN4 548 aaPredicted RBP18.62■□□□□ 0.57
USP6NL-204ENST00000606752 C1orf147Q96MC9 270 aaPredicted RBP18.62■□□□□ 0.57
USP6NL-204ENST00000606752 C1QTNF6Q9BXI9 259 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 POFUT1Q9H488 388 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 Q9UFV3 132 aa18.62■□□□□ 0.57
USP6NL-204ENST00000606752 METTL21EPA6NDL7 271 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 A8MXE2 369 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 CD3GP09693 182 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 SFTPCP11686 197 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 PSMB1P20618 241 aaKnown RBP18.61■□□□□ 0.57
USP6NL-204ENST00000606752 MTCP1P56278 107 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 RFPL4BQ6ZWI9 263 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 FAM169BQ8N8A8 192 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 CSNK2A3Q8NEV1 391 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 WBP1Q96G27 269 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 SLC22A4Q9H015 551 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 SLC7A11Q9UPY5 501 aa18.61■□□□□ 0.57
USP6NL-204ENST00000606752 TRAV18A0A075B6X5 111 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 NAT2P11245 290 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 BMP5P22003 454 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 RFX2P48378 723 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 MOB3CQ70IA8 216 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 NRARPQ7Z6K4 114 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 KCNG3Q8TAE7 436 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FCAMRQ8WWV6 532 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 SH3BGRL2Q9UJC5 107 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 SLC25A15Q9Y619 301 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FAM230AA0A1W2PPH8 454 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 CST4P01036 141 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 IGLV1-44P01699 117 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 SPNP16150 400 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 RBP2P50120 134 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FUT6P51993 359 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 RNASE12Q5GAN4 147 aaKnown RBP18.6■□□□□ 0.57
USP6NL-204ENST00000606752 TIMM23BQ5SRD1 257 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 RAB12Q6IQ22 244 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 CCBE1Q6UXH8 406 aaPredicted RBP18.6■□□□□ 0.57
USP6NL-204ENST00000606752 LHFPL2Q6ZUX7 228 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FTMTQ8N4E7 242 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 KDF1Q8NAX2 398 aaPredicted RBP18.6■□□□□ 0.57
USP6NL-204ENST00000606752 OR5D18Q8NGL1 313 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 TNFAIP8L1Q8WVP5 186 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FAM46BQ96A09 425 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 BORCS8Q96FH0 119 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 GAL3ST1Q99999 423 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 OR51B6Q9H340 312 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 FAIMQ9NVQ4 179 aa18.6■□□□□ 0.57
USP6NL-204ENST00000606752 CD300LBA8K4G0 201 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 SMPD2O60906 423 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 PLCXD3Q63HM9 321 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 MZT2BQ6NZ67 158 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 MTFR2Q6P444 385 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 OR52I2Q8NH67 350 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 GCDHQ92947 438 aaPredicted RBP18.59■□□□□ 0.57
USP6NL-204ENST00000606752 AUNIPQ9H7T9 357 aa18.59■□□□□ 0.57
USP6NL-204ENST00000606752 MOV10Q9HCE1 1003 aaKnown RBP18.59■□□□□ 0.57
USP6NL-204ENST00000606752 ZNF850A8MQ14 1090 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 LYRM1O43325 122 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 SSX4O60224 188 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 UCP2P55851 309 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 DNM1P46Q6ZS02 220 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 C1QL2Q7Z5L3 287 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 MRGPRGQ86SM5 289 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 TOMM5Q8N4H5 51 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 ITPKCQ96DU7 683 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 S100A13Q99584 98 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 PAPOLGQ9BWT3 736 aaKnown RBP18.58■□□□□ 0.57
USP6NL-204ENST00000606752 ING4Q9UNL4 249 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 SPTA1P02549 2419 aa18.58■□□□□ 0.57
USP6NL-204ENST00000606752 EEF1E1-BLOC1S5C9J1V9 151 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 ORC5O43913 435 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 SCGNO76038 276 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 PTHLHP12272 177 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 ZNF35P13682 527 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 ZP1P60852 638 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 PPP1CBP62140 327 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 SLC22A6Q4U2R8 563 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 FBXW12Q6X9E4 464 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 TMEM104Q8NE00 496 aa18.58■□□□□ 0.56
USP6NL-204ENST00000606752 S100PBPQ96BU1 408 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms