RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 CA10Q9NS85 328 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 SPATA2Q9UM82 520 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ETV7Q9Y603 341 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 ABCA12Q86UK0 2595 aa8.68□□□□□ -1.02
UPF1-213ENST00000601981 TEP1Q99973 2627 aaKnown RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 HRNRQ86YZ3 2850 aaPredicted RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 LOC100509620A0A075B734 347 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 A0A0U1RQV5 110 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 A0A1B0GTI1 187 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 MEGF11A6BM72 1044 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 FAM25AB3EWG3 89 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 FAM25CB3EWG5 89 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 FAM25GB3EWG6 89 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 F5H5K5 113 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 M0R135 149 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 ICMTO60725 284 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 IGLV3-1P01715 115 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 FAM157BP0CG42 384 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 CD37P11049 281 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 CCL2P13500 99 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 PRF1P14222 555 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 SNRPBP14678 240 aaKnown RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 ELK1P19419 428 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 DNASE1P24855 282 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 GCH1P30793 250 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 TALDO1P37837 337 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 SLC6A9P48067 706 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 UCP2P55851 309 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 KRTAP27-1Q3LI81 207 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 UBE2NLQ5JXB2 153 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 STEAP3Q658P3 488 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 ASPHD2Q6ICH7 369 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 DRAM2Q6UX65 266 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 BAIAP2L2Q6UXY1 529 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 Q6ZNX1 250 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 DOK3Q7L591 496 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 SNX29P2Q8IUI4 249 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 MUC15Q8N387 334 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 NKAIN3Q8N8D7 197 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 ZNF671Q8TAW3 534 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 LGALS14Q8TCE9 139 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 TMEM171Q8WVE6 324 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 PIGTQ969N2 578 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 APOBEC3DQ96AK3 386 aaPredicted RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 ZNF799Q96GE5 643 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 PGAM5Q96HS1 289 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 LURAP1Q96LR2 239 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 CCL19Q99731 98 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 PPP1R3EQ9H7J1 279 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 ZNF275Q9NSD4 429 aaPredicted RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 TBCCD1Q9NVR7 557 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 RABL2AQ9UBK7 228 aaPredicted RBP8.67□□□□□ -1.02
UPF1-213ENST00000601981 EXTL2Q9UBQ6 330 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 GPR160Q9UJ42 338 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 RABL2BQ9UNT1 228 aa8.67□□□□□ -1.02
UPF1-213ENST00000601981 SPG11Q96JI7 2443 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 E7EQL1 145 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 H3BSH0 61 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 SLC17A2O00624 439 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 SMPD2O60906 423 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 PAHP00439 452 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 MAS1P04201 325 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 EIF4EP06730 217 aaKnown RBP8.66□□□□□ -1.02
UPF1-213ENST00000601981 SERPINF1P36955 418 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 NR4A2P43354 598 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 DEFA1P59665 94 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 DEFA3P59666 94 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 SNRPD2P62316 118 aaKnown RBP8.66□□□□□ -1.02
UPF1-213ENST00000601981 NKX6-1P78426 367 aaPredicted RBP8.66□□□□□ -1.02
UPF1-213ENST00000601981 HGFACQ04756 655 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 MALLQ13021 153 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OXA1LQ15070 435 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 ZNF718Q3SXZ3 478 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 PYDC2Q56P42 97 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 HES5Q5TA89 166 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 GLT8D1Q68CQ7 371 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 DCDC5Q6ZRR9 648 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 Q6ZSR3 168 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 FAM57BQ71RH2 274 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OR8H2Q8N162 312 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 CENPSQ8N2Z9 138 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OR1J1Q8NGS3 322 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OR5H6Q8NGV6 325 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 LILRB1Q8NHL6 650 aaPredicted RBP8.66□□□□□ -1.02
UPF1-213ENST00000601981 SETD6Q8TBK2 473 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OR51E1Q8TCB6 317 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 NINJ1Q92982 152 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 OR51B6Q9H340 312 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 PLK3Q9H4B4 646 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 CBLN4Q9NTU7 201 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 TAS2R4Q9NYW5 299 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 STEAP1Q9UHE8 339 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 ARFGEF3Q5TH69 2177 aa8.66□□□□□ -1.02
UPF1-213ENST00000601981 APCP25054 2843 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 A0A0B4J203 849 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 A0A1B0GVG6 124 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 A0A1W2PPR1 153 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 B9A039 149 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 PTTG1O95997 202 aa8.65□□□□□ -1.02
UPF1-213ENST00000601981 HLA-DQB1P01920 261 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms