RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ZFHX3Q15911 3703 aa14.13□□□□□ -0.15
TRIM28-215ENST00000601150 A0A1B0GTI1 187 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 TMEM210A6NLX4 147 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 F5H0A9 414 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 P2RY10O00398 339 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 FADS2O95864 444 aaKnown RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 FAHP16930 419 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 ADARB1P78563 741 aaKnown RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 LCN2P80188 198 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 RAB40BQ12829 278 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 ZNF154Q13106 437 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 CDONQ4KMG0 1287 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 IL17RELQ6ZVW7 336 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 DOK3Q7L591 496 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 BOLLQ8N9W6 283 aaKnown RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 SETD9Q8NE22 299 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 RNF170Q96K19 258 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 MYCBPQ99417 103 aaPredicted RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 VCXQ9H320 206 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 RNPEPL1Q9HAU8 725 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 AMBNQ9NP70 447 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 MRPS18AQ9NVS2 196 aaKnown RBP14.12□□□□□ -0.15
TRIM28-215ENST00000601150 MIOXQ9UGB7 285 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 ENPP5Q9UJA9 477 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 PIGLQ9Y2B2 252 aa14.12□□□□□ -0.15
TRIM28-215ENST00000601150 LGALS8O00214 317 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 WBP4O75554 376 aaKnown RBP14.11□□□□□ -0.15
TRIM28-215ENST00000601150 CLIC3O95833 236 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 WNT2P09544 360 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 FAM157CP0CG43 387 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 RPS2P15880 293 aaKnown RBP14.11□□□□□ -0.15
TRIM28-215ENST00000601150 CD80P33681 288 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 THBS2P35442 1172 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 ACTA2P62736 377 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 ACTG2P63267 376 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 CSNK2BP67870 215 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 KCNJ8Q15842 424 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 KLHL22Q53GT1 634 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 ESCO2Q56NI9 601 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 DCDC5Q6ZRR9 648 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 Q6ZSR3 168 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 KCTD8Q6ZWB6 473 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 C11orf53Q8IXP5 236 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 C19orf18Q8NEA5 215 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 DEFB108BQ8NET1 73 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 HPSE2Q8WWQ2 592 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 NEIL1Q96FI4 390 aaPredicted RBP14.11□□□□□ -0.15
TRIM28-215ENST00000601150 TLNRD1Q9H1K6 362 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 TRIM36Q9NQ86 728 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 INPP5EQ9NRR6 644 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 LRCH1Q9Y2L9 728 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 V9GYS6 101 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 ARHGAP32A7KAX9 2087 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 DOCK11Q5JSL3 2073 aa14.11□□□□□ -0.15
TRIM28-215ENST00000601150 A0A0G2JMP0 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 A0A0X1KG70 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 A0A1B0GVI7 797 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 DHRS7CA6NNS2 312 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 LHBP01229 141 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 IGHA1P01876 353 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 SRD5A1P18405 259 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 CCL1P22362 96 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 PSMB10P40306 273 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR12D2P58182 307 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 SLC34A1Q06495 639 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 IL18R1Q13478 541 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 GALEQ14376 348 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 CEACAM21Q3KPI0 293 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 KRTAP21-3Q3LHN1 58 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 WDR38Q5JTN6 314 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 CEP78Q5JTW2 689 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 WDR82Q6UXN9 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 MOB3CQ70IA8 216 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 NLRC3Q7RTR2 1065 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 LHFPL3Q86UP9 236 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 PRSS35Q8N3Z0 413 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 GCSAMQ8N6F7 178 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 CCDC54Q8NEL0 328 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR4M2Q8NGB6 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR8B3Q8NGG8 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR52I1Q8NGK6 324 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR14K1Q8NGZ2 314 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 LRRC29Q8WV35 223 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 OR8B2Q96RD0 313 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 ADI1Q9BV57 179 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 FGF23Q9GZV9 251 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-215ENST00000601150 METTL17Q9H7H0 456 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-215ENST00000601150 NKX1-2Q9UD57 310 aaPredicted RBP14.1□□□□□ -0.15
TRIM28-215ENST00000601150 MYRFQ9Y2G1 1151 aa14.1□□□□□ -0.15
TRIM28-215ENST00000601150 ANK3Q12955 4377 aaKnown RBP14.1□□□□□ -0.15
TRIM28-215ENST00000601150 TRAV38-1A0A0B4J264 116 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 OOEPA6NGQ2 149 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 OR5B21A6NL26 309 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 A8MXK9 166 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 C3orf80F5H4A9 247 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 H0YAE9 185 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 J3QLW9 94 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 CDIPTO14735 213 aa14.09□□□□□ -0.15
TRIM28-215ENST00000601150 NRASP01111 189 aa14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms