RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	RTL8A	Q9BWD3	113 aa		12.89	□□□□□ -0.35
PLD3-223	ENST00000600948	GPR84	Q9NQS5	396 aa		12.89	□□□□□ -0.35
PLD3-223	ENST00000600948	MRM2	Q9UI43	246 aa	Known RBP	12.89	□□□□□ -0.35
PLD3-223	ENST00000600948	ZNF816-ZNF321P	A0A0X1KG74	233 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	C22orf46	C9J442	243 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ANKHD1-EIF4EBP3	H7C0V5	636 aa	Predicted RBP	12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	CDIPT	O14735	213 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ADAM20	O43506	726 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	NDUFA2	O43678	99 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	RGS9	O75916	674 aa	Predicted RBP	12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	APOL3	O95236	402 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	GYPA	P02724	150 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	TTR	P02766	147 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ATP6V1B1	P15313	513 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ALDH3A2	P51648	485 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	CDC42	P60953	191 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	EGR3	Q06889	387 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	POU4F2	Q12837	409 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	TUSC1	Q2TAM9	212 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ARMCX4	Q5H9R4	360 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	FAM76B	Q5HYJ3	339 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	BTNL3	Q6UXE8	466 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	PLEKHG7	Q6ZR37	379 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	USP43	Q70EL4	1123 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ZDHHC23	Q8IYP9	409 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	OR51E1	Q8TCB6	317 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	EME1	Q96AY2	570 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	FAM71F1	Q96KD3	344 aa	Predicted RBP	12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	HRASLS5	Q96KN8	279 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	SLC6A7	Q99884	636 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	NUDT16L1	Q9BRJ7	211 aa	Known RBP	12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	MOB1A	Q9H8S9	216 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	SMURF1	Q9HCE7	757 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	ERVK-18	Q9QC07	812 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948		R4GMQ9	66 aa		12.88	□□□□□ -0.35
PLD3-223	ENST00000600948	IGHV3OR15-7	A0A075B7D8	119 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	KIR2DS1	A0A191URI9	304 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	TMEM210	A6NLX4	147 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	SRRM5	B3KS81	715 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	LOC110117498-PIK3R3	F6TDL0	507 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	FCN3	O75636	299 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	OR2T7	P0C7T2	308 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	PPIAL4G	P0DN37	164 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	NPY4R	P50391	375 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	HILS1	P60008	231 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	TMED1	Q13445	227 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	ZIK1	Q3SY52	487 aa	Predicted RBP	12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	COMMD2	Q86X83	199 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	C10orf67	Q8IYJ2	551 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	ELMOD2	Q8IZ81	293 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	CBR4	Q8N4T8	237 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	OR2T27	Q8NH04	317 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	UBE2F	Q969M7	185 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	RNF170	Q96K19	258 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	TECTB	Q96PL2	329 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	TBX5	Q99593	518 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	SUCNR1	Q9BXA5	334 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	KAAG1	Q9UBP8	84 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	OR52A1	Q9UKL2	312 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	NUP50	Q9UKX7	468 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	GTF2A1L	Q9UNN4	478 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948	ORC6	Q9Y5N6	252 aa		12.87	□□□□□ -0.35
PLD3-223	ENST00000600948		A0A1B0GTI1	187 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948		A0A1W2PQL4	384 aa	Predicted RBP	12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	DHRS3	O75911	302 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	MUC1	P15941	1255 aa	Predicted RBP	12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	FAH	P16930	419 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ELF3	P78545	371 aa	Predicted RBP	12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ZNF684	Q5T5D7	378 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	BCL2L15	Q5TBC7	163 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ZBTB37	Q5TC79	503 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	KCTD8	Q6ZWB6	473 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	BPIFB2	Q8N4F0	458 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	SCCPDH	Q8NBX0	429 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	OR10Z1	Q8NGY1	313 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ZFAND2B	Q8WV99	257 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	TRUB1	Q8WWH5	349 aa	Known RBP	12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	C22orf15	Q8WYQ4	148 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	RPL3L	Q92901	407 aa	Known RBP	12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	RFK	Q969G6	155 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	UPRT	Q96BW1	309 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	SEH1L	Q96EE3	360 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	MBOAT4	Q96T53	435 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	S100A14	Q9HCY8	104 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	IMPAD1	Q9NX62	359 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ZNF69	Q9UC07	566 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	PIGL	Q9Y2B2	252 aa		12.86	□□□□□ -0.35
PLD3-223	ENST00000600948	ENSA	O43768	121 aa	Known RBP	12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	MTRF1	O75570	445 aa	Known RBP	12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	KRT8	P05787	483 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	FPR2	P25090	351 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	GPM6A	P51674	278 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	SNRPG	P62308	76 aa	Known RBP	12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	RIPPLY1	Q0D2K3	151 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	MICB	Q29980	383 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	CEACAM21	Q3KPI0	293 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	WDR38	Q5JTN6	314 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	CEP78	Q5JTW2	689 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948	SLC25A30	Q5SVS4	291 aa		12.85	□□□□□ -0.35
PLD3-223	ENST00000600948		Q6ZSR3	168 aa		12.85	□□□□□ -0.35

Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms