RNA–Protein interactions for RNA: ENST00000600289.6

LSM4-206, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 1,113 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-206ENST00000600289 LRCH1Q9Y2L9 728 aa13.55□□□□□ -0.24
LSM4-206ENST00000600289 V9GYS6 101 aa13.55□□□□□ -0.24
LSM4-206ENST00000600289 DOCK11Q5JSL3 2073 aa13.55□□□□□ -0.24
LSM4-206ENST00000600289 A0A1B0GTI1 187 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 MTRF1O75570 445 aaKnown RBP13.54□□□□□ -0.24
LSM4-206ENST00000600289 LHBP01229 141 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 WNT2P09544 360 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 PEX2P28328 305 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 CFHR2P36980 270 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 RBMXP38159 391 aaKnown RBP13.54□□□□□ -0.24
LSM4-206ENST00000600289 RIPPLY1Q0D2K3 151 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 ZNF154Q13106 437 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 OGFRL1Q5TC84 451 aaPredicted RBP13.54□□□□□ -0.24
LSM4-206ENST00000600289 LPCAT4Q643R3 524 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 DCDC5Q6ZRR9 648 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 KCTD20Q7Z5Y7 419 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 ZDHHC23Q8IYP9 409 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 GCSAMQ8N6F7 178 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 CCDC54Q8NEL0 328 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 APH1BQ8WW43 257 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 RORBQ92753 470 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 LGALS12Q96DT0 336 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 MYCBPQ99417 103 aaPredicted RBP13.54□□□□□ -0.24
LSM4-206ENST00000600289 TMEM246Q9BRR3 403 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 C1orf123Q9NWV4 160 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 UBAP1Q9NZ09 502 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 MIOXQ9UGB7 285 aa13.54□□□□□ -0.24
LSM4-206ENST00000600289 A0A0G2JMP0 313 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 A0A0X1KG70 313 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 ZNF850A8MQ14 1090 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 ANKRD65E5RJM6 399 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 J3QLI3 93 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 LGALS8O00214 317 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 IGHA1P01876 353 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 GRPP07492 148 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 RAB40BQ12829 278 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 KCNJ8Q15842 424 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 ZNF691Q5VV52 312 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 TTC23Q5W5X9 447 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 FDX2Q6P4F2 183 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 DOK3Q7L591 496 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 FAM220AQ7Z4H9 259 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 TEX29Q8N6K0 151 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 ACBD7Q8N6N7 88 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 OR4M2Q8NGB6 313 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 OR10Z1Q8NGY1 313 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 HPSE2Q8WWQ2 592 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 PPP1R14AQ96A00 147 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 RNF166Q96A37 237 aaPredicted RBP13.53□□□□□ -0.24
LSM4-206ENST00000600289 PPP1R3EQ9H7J1 279 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 DCLRE1BQ9H816 532 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 LPAR2Q9HBW0 351 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 INPP5EQ9NRR6 644 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 AASSQ9UDR5 926 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 ENPP5Q9UJA9 477 aa13.53□□□□□ -0.24
LSM4-206ENST00000600289 OR5B21A6NL26 309 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 A6NLC8 198 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 SPRY1O43609 319 aaPredicted RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 NDUFA2O43678 99 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 RPS2P15880 293 aaKnown RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 SRD5A1P18405 259 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 PSMB10P40306 273 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 ACTA2P62736 377 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 ACTG2P63267 376 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 ADARB1P78563 741 aaKnown RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 IL18R1Q13478 541 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 CEACAM21Q3KPI0 293 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 TEX36Q5VZQ5 186 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 TMEM42Q69YG0 159 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 WDR82Q6UXN9 313 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 THAP5Q7Z6K1 395 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 COMMD2Q86X83 199 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 OR14K1Q8NGZ2 314 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 PIGCQ92535 297 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 NEIL1Q96FI4 390 aaPredicted RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 MRPL48Q96GC5 212 aaKnown RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 FAM71F1Q96KD3 344 aaPredicted RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 JAM3Q9BX67 310 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 FGF23Q9GZV9 251 aaPredicted RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 ACOXLQ9NUZ1 547 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 GTF2A1LQ9UNN4 478 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 SLC22A13Q9Y226 551 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 PIGLQ9Y2B2 252 aa13.52□□□□□ -0.25
LSM4-206ENST00000600289 RPL36Q9Y3U8 105 aaKnown RBP13.52□□□□□ -0.25
LSM4-206ENST00000600289 TRAV38-1A0A0B4J264 116 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 DAPL1A0PJW8 107 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 OOEPA6NGQ2 149 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 SRRM5B3KS81 715 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 TNFRSF13BO14836 293 aaPredicted RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 WBP4O75554 376 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 RPP14O95059 124 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 FADS2O95864 444 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 UBCP0CG48 685 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 ZFP36P26651 326 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 SEC61A1P61619 476 aaKnown RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 ELF3P78545 371 aaPredicted RBP13.51□□□□□ -0.25
LSM4-206ENST00000600289 LRRC36Q1X8D7 754 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 TP53I3Q53FA7 332 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 ESCO2Q56NI9 601 aa13.51□□□□□ -0.25
LSM4-206ENST00000600289 FAM201AQ5SY85 155 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms