RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SLC25A16P16260 332 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 MYL12AP19105 171 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 TNFRSF1AP19438 455 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 TNFSF4P23510 183 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 THBS2P35442 1172 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 SRP9P49458 86 aaKnown RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 GBX2P52951 348 aaPredicted RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 HOXA4Q00056 320 aaPredicted RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 LOXL1Q08397 574 aaPredicted RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 MRPL28Q13084 256 aaKnown RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 CDK5R1Q15078 307 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 CARTPTQ16568 116 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 ZNF181Q2M3W8 571 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 CCDC58Q4VC31 144 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 TMEM244Q5VVB8 128 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 DMKNQ6E0U4 476 aaPredicted RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 TMPRSS11AQ6ZMR5 421 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 SPERTQ8NA61 448 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 MAPK1IP1LQ8NDC0 245 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 Q8TCH9 128 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 PIGCQ92535 297 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 CCL17Q92583 94 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 MYCBPQ99417 103 aaPredicted RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 PDCD1LG2Q9BQ51 273 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 PAPOLGQ9BWT3 736 aaKnown RBP11.58□□□□□ -0.56
VRK3-219ENST00000600137 TMEM106BQ9NUM4 274 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 SCN3BQ9NY72 215 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 PPP1R3CQ9UQK1 317 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 TPRKBQ9Y3C4 175 aa11.58□□□□□ -0.56
VRK3-219ENST00000600137 A0A1B0GVI7 797 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 TMEM178BH3BS89 294 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 SYT7O43581 403 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 MT-ND2P03891 347 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 UBCP0CG48 685 aaKnown RBP11.57□□□□□ -0.56
VRK3-219ENST00000600137 CD99P14209 185 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 KRTAP1-1Q07627 177 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 UBE2V2Q15819 145 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 HFEQ30201 348 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 RBM48Q5RL73 367 aaKnown RBP11.57□□□□□ -0.56
VRK3-219ENST00000600137 RPL22L1Q6P5R6 122 aaKnown RBP11.57□□□□□ -0.56
VRK3-219ENST00000600137 MOGAT3Q86VF5 341 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 CCDC54Q8NEL0 328 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 OR1M1Q8NGA1 313 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 MYDGFQ969H8 173 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 ADAT3Q96EY9 351 aaPredicted RBP11.57□□□□□ -0.56
VRK3-219ENST00000600137 OR5M11Q96RB7 305 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 PIMREGQ9BSJ6 248 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 TLNRD1Q9H1K6 362 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 ENPP5Q9UJA9 477 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 NOP16Q9Y3C1 178 aaKnown RBP11.57□□□□□ -0.56
VRK3-219ENST00000600137 LRRC42Q9Y546 428 aa11.57□□□□□ -0.56
VRK3-219ENST00000600137 TRBV2A0A0J9YWF9 115 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 NRASP01111 189 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 LHBP01229 141 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 FOSL1P15407 271 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 GPR6P46095 362 aaPredicted RBP11.56□□□□□ -0.56
VRK3-219ENST00000600137 WNT4P56705 351 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 LMO4P61968 165 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 RPS11P62280 158 aaKnown RBP eCLIP11.56□□□□□ -0.56
VRK3-219ENST00000600137 ACSM1Q08AH1 577 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 ZNF154Q13106 437 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 CEACAM21Q3KPI0 293 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 CLVS2Q5SYC1 327 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 ASPHD2Q6ICH7 369 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 ZNF826PQ6ZT77 177 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 COMMD2Q86X83 199 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 ZDHHC23Q8IYP9 409 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 HAVCR2Q8TDQ0 301 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 ERGIC1Q969X5 290 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 C18orf12Q96KH6 178 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 PGLYRP3Q96LB9 341 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 UFSP2Q9NUQ7 469 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 CHCHD3Q9NX63 227 aaKnown RBP11.56□□□□□ -0.56
VRK3-219ENST00000600137 HHLA2Q9UM44 414 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 WIPI2Q9Y4P8 454 aa11.56□□□□□ -0.56
VRK3-219ENST00000600137 IGKV1-9A0A0C4DH69 117 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 TMEM212A6NML5 194 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 PPIHO43447 177 aaKnown RBP11.55□□□□□ -0.56
VRK3-219ENST00000600137 RGS10O43665 173 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 CYB5R3P00387 301 aaPredicted RBP11.55□□□□□ -0.56
VRK3-219ENST00000600137 IGHV2-70P01814 119 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 GRPP07492 148 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 USF1P22415 310 aaPredicted RBP11.55□□□□□ -0.56
VRK3-219ENST00000600137 IL2RGP31785 369 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 CFHR2P36980 270 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 GNALP38405 381 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 MED21Q13503 144 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 CEP78Q5JTW2 689 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 FAM201AQ5SY85 155 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 AVPI1Q5T686 147 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 CRIP3Q6Q6R5 217 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 MOB3CQ70IA8 216 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 PRSS48Q7RTY5 328 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 FTMTQ8N4E7 242 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 ZNF676Q8N7Q3 588 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 ZFP41Q8N8Y5 198 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 OR5A2Q8NGI9 324 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 OR5AK2Q8NH90 309 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 FGGYQ96C11 551 aa11.55□□□□□ -0.56
VRK3-219ENST00000600137 C10orf35Q96D05 121 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms