RNA–Protein interactions for RNA: ENST00000599543.3

PNKP-213, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 986 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-213ENST00000599543 PCGF1Q9BSM1 259 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 UNKLQ9H9P5 680 aaKnown RBP15.57■□□□□ 0.08
PNKP-213ENST00000599543 ADGRL4Q9HBW9 690 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 C14orf119Q9NWQ9 140 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 C1orf123Q9NWV4 160 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 CTSZQ9UBR2 303 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 LAMP5Q9UJQ1 280 aa15.57■□□□□ 0.08
PNKP-213ENST00000599543 TRAV38-1A0A0B4J264 116 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 LOC100130705A0A1B0GUX0 176 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 hCG_1807616A0A1W2PRN6 198 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 OOEPA6NGQ2 149 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 HOXA3O43365 443 aaPredicted RBP15.56■□□□□ 0.08
PNKP-213ENST00000599543 TBX1O43435 398 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 ADAM20O43506 726 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 ANXA2P07355 339 aaKnown RBP15.56■□□□□ 0.08
PNKP-213ENST00000599543 GRPP07492 148 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 HSD11B1P28845 292 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 OPRL1P41146 370 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 GRB2P62993 217 aaKnown RBP15.56■□□□□ 0.08
PNKP-213ENST00000599543 SLC35F2Q8IXU6 374 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 ZDHHC16Q969W1 377 aa15.56■□□□□ 0.08
PNKP-213ENST00000599543 SMPD3Q9NY59 655 aaPredicted RBP15.56■□□□□ 0.08
PNKP-213ENST00000599543 SLC22A31A6NKX4 558 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 ANKRD30BLA7E2S9 258 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 NDUFA2O43678 99 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 LIPFP07098 398 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 ALOX5APP20292 161 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 BPIFB3P59826 476 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 DEFB112Q30KQ8 113 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 PRR31Q5SQ13 230 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 OGFRL1Q5TC84 451 aaPredicted RBP15.55■□□□□ 0.08
PNKP-213ENST00000599543 C16orf87Q6PH81 154 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 FAM57BQ71RH2 274 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 ENTHD1Q8IYW4 607 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 ZNF454Q8N9F8 522 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 PNLDC1Q8NA58 520 aaKnown RBP15.55■□□□□ 0.08
PNKP-213ENST00000599543 OR8S1Q8NH09 359 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 CYGBQ8WWM9 190 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 YIPF3Q9GZM5 350 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 DCLRE1BQ9H816 532 aa15.55■□□□□ 0.08
PNKP-213ENST00000599543 ZNF879B4DU55 563 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 TOX4O94842 621 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 HTR1FP30939 366 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 CFHR2P36980 270 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 DDOSTP39656 456 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 ZNF121P58317 390 aaPredicted RBP15.54■□□□□ 0.08
PNKP-213ENST00000599543 TIGD6Q17RP2 521 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 GFOD2Q3B7J2 385 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 PLEKHG7Q6ZR37 379 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 ZNF826PQ6ZT77 177 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 SSX6Q7RTT6 188 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 KRT77Q7Z794 578 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.54■□□□□ 0.08
PNKP-213ENST00000599543 ZNF555Q8NEP9 628 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 SPSB4Q96A44 273 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 APOL4Q9BPW4 351 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 ZNF696Q9H7X3 374 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 SP140LQ9H930 580 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 LRP12Q9Y561 859 aa15.54■□□□□ 0.08
PNKP-213ENST00000599543 POM121CA8CG34 1229 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 SRRM5B3KS81 715 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 H0YHG0 523 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 P2RY10O00398 339 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 CASQ2O14958 399 aaPredicted RBP15.53■□□□□ 0.08
PNKP-213ENST00000599543 APOC1P02654 83 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 GYPAP02724 150 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 SFTPBP07988 381 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 CXCR4P61073 352 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 SNRPGP62308 76 aaKnown RBP15.53■□□□□ 0.08
PNKP-213ENST00000599543 METTL11BQ5VVY1 283 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 GCSAMQ8N6F7 178 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 NRG4Q8WWG1 115 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 TAF15Q92804 592 aaKnown RBP eCLIP15.53■□□□□ 0.08
PNKP-213ENST00000599543 TMIGD2Q96BF3 282 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 REEP6Q96HR9 211 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 SMURF1Q9HCE7 757 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 AMBNQ9NP70 447 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 ZNF319Q9P2F9 582 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 WARS2Q9UGM6 360 aaKnown RBP15.53■□□□□ 0.08
PNKP-213ENST00000599543 IKZF2Q9UKS7 526 aa15.53■□□□□ 0.08
PNKP-213ENST00000599543 GABRB1P18505 474 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 ATP6V1E1P36543 226 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 FAM3AP98173 230 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 SLC34A1Q06495 639 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 RUSC1-AS1Q66K80 236 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 FAM90A1Q86YD7 464 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 OR10H4Q8NGA5 316 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 OR52H1Q8NGJ2 320 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 GATAD2BQ8WXI9 593 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 RNFT2Q96EX2 444 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 PGAM5Q96HS1 289 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 WDFY2Q96P53 400 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 PRDM13Q9H4Q3 707 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 RNPEPL1Q9HAU8 725 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 NOX4Q9NPH5 578 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 TNFRSF19Q9NS68 423 aa15.52■□□□□ 0.08
PNKP-213ENST00000599543 ZNF670-ZNF695F2Z2N8 137 aa15.51■□□□□ 0.07
PNKP-213ENST00000599543 DVL1O14640 695 aa15.51■□□□□ 0.07
PNKP-213ENST00000599543 TNFRSF13BO14836 293 aaPredicted RBP15.51■□□□□ 0.07
PNKP-213ENST00000599543 SLC16A6O15403 523 aa15.51■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms