RNA–Protein interactions for RNA: ENST00000599322.5

LIG1-218, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 620 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-218ENST00000599322 ENSAO43768 121 aaKnown RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 ADRA2CP18825 462 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 SEC61A1P61619 476 aaKnown RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 EFNB1P98172 346 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 WDR25Q64LD2 544 aaPredicted RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 ZNF826PQ6ZT77 177 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 BCDIN3DQ7Z5W3 292 aaKnown RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 PNLDC1Q8NA58 520 aaKnown RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 C19orf18Q8NEA5 215 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 OR10H4Q8NGA5 316 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 ZNF671Q8TAW3 534 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 OR51E1Q8TCB6 317 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 APOL4Q9BPW4 351 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 NUDT16L1Q9BRJ7 211 aaKnown RBP11.82□□□□□ -0.52
LIG1-218ENST00000599322 ADGRL4Q9HBW9 690 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 GPR84Q9NQS5 396 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 MMP26Q9NRE1 261 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 OR52A1Q9UKL2 312 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 NUP50Q9UKX7 468 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 COPS3Q9UNS2 423 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 PCDHGB1Q9Y5G3 927 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 R4GMQ9 66 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 ANK2Q01484 3957 aa11.82□□□□□ -0.52
LIG1-218ENST00000599322 IGHV2-70DA0A0C4DH43 119 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 METTL15A6NJ78 407 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 OR5B21A6NL26 309 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 TRAPPC2LH3BP13 241 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 CDIPTO14735 213 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 MPZL2O60487 215 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 BAG2O95816 211 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ECDO95905 644 aaPredicted RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 GYPAP02724 150 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ALPLP05186 524 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 POLR2IP36954 125 aaKnown RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 GNG3P63215 75 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ACTC1P68032 377 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ACTA1P68133 377 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 SRSF2Q01130 221 aaKnown RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 HNRNPA0Q13151 305 aaKnown RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 C11orf91Q3C1V1 193 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ZIK1Q3SY52 487 aaPredicted RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 ZNF684Q5T5D7 378 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ZBTB49Q6ZSB9 765 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 USP43Q70EL4 1123 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 MOB3CQ70IA8 216 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 CBR4Q8N4T8 237 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 GCSAMQ8N6F7 178 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 OR5A2Q8NGI9 324 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 OR10Z1Q8NGY1 313 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ZFAND2BQ8WV99 257 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 OR5P3Q8WZ94 311 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 EME1Q96AY2 570 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 ITPKCQ96DU7 683 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 Q96MT0 163 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 TBX5Q99593 518 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 C19orf24Q9BVV8 132 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 MS4A7Q9GZW8 240 aaPredicted RBP11.81□□□□□ -0.52
LIG1-218ENST00000599322 PLEKHA1Q9HB21 404 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 S100A14Q9HCY8 104 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 PIGLQ9Y2B2 252 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 GMPPBQ9Y5P6 360 aa11.81□□□□□ -0.52
LIG1-218ENST00000599322 KIR2DS1A0A191URI9 304 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 A0A1B0GVI7 797 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 NKX6-3A6NJ46 265 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 TMPRSS2O15393 492 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 NDUFB3O43676 98 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 SULT1C4O75897 302 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 DHRS3O75911 302 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 RPP14O95059 124 aaKnown RBP11.8□□□□□ -0.52
LIG1-218ENST00000599322 AVPP01185 164 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 PPIAL4GP0DN37 164 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 ANOS1P23352 680 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 RBMXP38159 391 aaKnown RBP11.8□□□□□ -0.52
LIG1-218ENST00000599322 PSMB10P40306 273 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 MTNR1AP48039 350 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 CEACAM21Q3KPI0 293 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 PLCXD3Q63HM9 321 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 LYPD2Q6UXB3 125 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 WDR82Q6UXN9 313 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 DOK3Q7L591 496 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 ELMOD2Q8IZ81 293 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 CCDC54Q8NEL0 328 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 C12orf43Q96C57 262 aaKnown RBP11.8□□□□□ -0.52
LIG1-218ENST00000599322 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 LYZL4Q96KX0 146 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 OPN4Q9UHM6 478 aa11.8□□□□□ -0.52
LIG1-218ENST00000599322 ZNF732B4DXR9 585 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 H3BNX3 289 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 GPR37O15354 613 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 SERPINA3P01011 423 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 NRASP01111 189 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 LHBP01229 141 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 ACKR3P25106 362 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 CFHR2P36980 270 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 GPM6AP51674 278 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 CSNK2BP67870 215 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 PAX8Q06710 450 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 LRRC10Q5BKY1 277 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 CLVS2Q5SYC1 327 aa11.79□□□□□ -0.52
LIG1-218ENST00000599322 TEX36Q5VZQ5 186 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms