RNA–Protein interactions for RNA: ENST00000596938.1

CCDC9-203, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 457 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-203ENST00000596938 ESM1Q9NQ30 184 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CLN6Q9NWW5 311 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 CTSZQ9UBR2 303 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 COPS3Q9UNS2 423 aa8.74□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF816-ZNF321PA0A0X1KG74 233 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 TMEM89A2RUT3 159 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PRR32B1ATL7 298 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 SRRM5B3KS81 715 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 C22orf46C9J442 243 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PSMD9O00233 223 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 GPR37O15354 613 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 IGHV4-38-2P0DP08 117 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 EGR1P18146 543 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 POLR2IP36954 125 aaKnown RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 MTNR1AP48039 350 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 FGF12P61328 243 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 CSNK2BP67870 215 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 EGR3Q06889 387 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 RIPPLY1Q0D2K3 151 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF829Q3KNS6 432 aaPredicted RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 CEACAM21Q3KPI0 293 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ZBTB37Q5TC79 503 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF322Q6U7Q0 402 aaPredicted RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 GID4Q8IVV7 300 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ZDHHC23Q8IYP9 409 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 BCL6BQ8N143 479 aaPredicted RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PNLDC1Q8NA58 520 aaKnown RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 LRRC29Q8WV35 223 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PIGCQ92535 297 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 RNF170Q96K19 258 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 DMRTB1Q96MA1 342 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 TECTBQ96PL2 329 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 IL4I1Q96RQ9 567 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PKP2Q99959 881 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 GABARAPL3Q9BY60 117 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 SEMA6AQ9H2E6 1030 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 RASSF4Q9H2L5 321 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 PRDM13Q9H4Q3 707 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ADGRL4Q9HBW9 690 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 WARS2Q9UGM6 360 aaKnown RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 NUFIP1Q9UHK0 495 aaKnown RBP8.73□□□□□ -1.01
CCDC9-203ENST00000596938 OAZ3Q9UMX2 235 aa8.73□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF879B4DU55 563 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF670-ZNF695F2Z2N8 137 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 CLDN34H7C241 214 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 M0R129 80 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 DVL1O14640 695 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 TMPRSS2O15393 492 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 SRSF10O75494 262 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 PRTN3P24158 256 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 HTR1FP30939 366 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 TGM4P49221 684 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 CXCR4P61073 352 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 UBA52P62987 128 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 GNG3P63215 75 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 POU4F2Q12837 409 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 TMED1Q13445 227 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 C12orf54Q6X4T0 127 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 Q6ZSR3 168 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 BTN2A1Q7KYR7 527 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 SLC36A1Q7Z2H8 476 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 SLC35F2Q8IXU6 374 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 C10orf67Q8IYJ2 551 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 SCCPDHQ8NBX0 429 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 OR5A2Q8NGI9 324 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 OR8J1Q8NGP2 316 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 FAM81AQ8TBF8 368 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 OR51E1Q8TCB6 317 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 TRUB1Q8WWH5 349 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 HPSE2Q8WWQ2 592 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 RPL3LQ92901 407 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 GCDHQ92947 438 aaPredicted RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 PPP1R14AQ96A00 147 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 ZNF48Q96MX3 618 aaPredicted RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 APOL4Q9BPW4 351 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 RBM4BQ9BQ04 359 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 FGF23Q9GZV9 251 aaPredicted RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 DNTTIP1Q9H147 329 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 OR51I2Q9H344 312 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 ZMAT3Q9HA38 289 aaKnown RBP8.72□□□□□ -1.01
CCDC9-203ENST00000596938 SMURF1Q9HCE7 757 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 GPR84Q9NQS5 396 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 IKZF2Q9UKS7 526 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 TENM1Q9UKZ4 2725 aa8.72□□□□□ -1.01
CCDC9-203ENST00000596938 IGHV3OR15-7A0A075B7D8 119 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 OR5B21A6NL26 309 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 P2RY10O00398 339 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 MTRF1O75570 445 aaKnown RBP8.71□□□□□ -1.02
CCDC9-203ENST00000596938 FCN3O75636 299 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 TTRP02766 147 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 OR2T7P0C7T2 308 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 MMP9P14780 707 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 AMY2BP19961 511 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 GPM6AP51674 278 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 ACTG1P63261 375 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 BAMBIQ13145 260 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 WDR38Q5JTN6 314 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 GPR157Q5UAW9 335 aa8.71□□□□□ -1.02
CCDC9-203ENST00000596938 STUMQ69YW2 141 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms