RNA–Protein interactions for RNA: ENST00000596672.5

LIG1-213, Transcript of DNA ligase 1, humanhuman

TSL 3

Gene LIG1, Length 792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-213ENST00000596672 SRSF4Q08170 494 aaKnown RBP8.66□□□□□ -1.02
LIG1-213ENST00000596672 BAMBIQ13145 260 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 GK3PQ14409 553 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 TAF13Q15543 124 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OR8B8Q15620 311 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 TEX36Q5VZQ5 186 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 FAHD1Q6P587 224 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 LRRN1Q6UXK5 716 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 PLPP7Q8NBV4 271 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OR1M1Q8NGA1 313 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OR8B12Q8NGG6 310 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 TEX47Q8TBZ9 253 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 TFAP2CQ92754 450 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 OTULINQ96BN8 352 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 NR1H4Q96RI1 486 aaPredicted RBP8.66□□□□□ -1.02
LIG1-213ENST00000596672 CCL13Q99616 98 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 MRI1Q9BV20 369 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ADI1Q9BV57 179 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 TLNRD1Q9H1K6 362 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 FN3KRPQ9HA64 309 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 SLC25A19Q9HC21 320 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 CLN8Q9UBY8 286 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 SCOCQ9UIL1 159 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 ORC6Q9Y5N6 252 aa8.66□□□□□ -1.02
LIG1-213ENST00000596672 MAGEA13PA6NCF6 341 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 DVL1O14640 695 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 XRCC2O43543 280 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 PRKYO43930 277 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 SRSF10O75494 262 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 IFNGP01579 166 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 RNASE1P07998 156 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 GNAO1P09471 354 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 CPT2P23786 658 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 POLR2IP36954 125 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 CAPGP40121 348 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 KRTAP10-3P60369 221 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 GRB2P62993 217 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 ADARB1P78563 741 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 GFOD2Q3B7J2 385 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 WDR38Q5JTN6 314 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 KDM4DQ6B0I6 523 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 KRT74Q7RTS7 529 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 C1orf87Q8N0U7 546 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 PIP4P2Q8N4L2 257 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 TEX29Q8N6K0 151 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 FAM216BQ8N7L0 139 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 OR5T2Q8NGG2 359 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 OR11L1Q8NGX0 322 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 LRRC29Q8WV35 223 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 RPL3LQ92901 407 aaKnown RBP8.65□□□□□ -1.02
LIG1-213ENST00000596672 TTTY10Q9BZA0 68 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 SLC22A4Q9H015 551 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 RIBC2Q9H4K1 309 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 KRT84Q9NSB2 600 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 FAM118AQ9NWS6 357 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 FAM206AQ9NX38 181 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 PCDHGB5Q9Y5G0 923 aa8.65□□□□□ -1.02
LIG1-213ENST00000596672 NOTCH3Q9UM47 2321 aa8.65□□□□□ -1.03
LIG1-213ENST00000596672 DSCAML1Q8TD84 2053 aa8.65□□□□□ -1.03
LIG1-213ENST00000596672 A6NLC8 198 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ZNF850A8MQ14 1090 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ZNF879B4DU55 563 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 PRR23D1E9PI22 279 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 CLDN34H7C241 214 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 CDIPTO14735 213 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 HOXA3O43365 443 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 RHBDL1O75783 438 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 CLIC3O95833 236 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 IGLV3-1P01715 115 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 MRPL3P09001 348 aaKnown RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 PRR23D2P0DMB1 279 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 ANXA8P13928 327 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 IRF2P14316 349 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 MDKP21741 143 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 OMGP23515 440 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 TGM4P49221 684 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 GMFBP60983 142 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ARF6P62330 175 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 MFGE8Q08431 387 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 APOFQ13790 326 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 TIGD6Q17RP2 521 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 FAM76BQ5HYJ3 339 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 BTN2A1Q7KYR7 527 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 Q8N7P7 452 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 C3orf56Q8N813 242 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 LY6G5BQ8NDX9 201 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ZNF555Q8NEP9 628 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 THEM6Q8WUY1 208 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 OR5P3Q8WZ94 311 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 PGAM5Q96HS1 289 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 PLEKHA8Q96JA3 519 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 TECTBQ96PL2 329 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 JMJD8Q96S16 334 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 TEAD3Q99594 435 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 PCGF1Q9BSM1 259 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ZNF747Q9BV97 191 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 FAM192AQ9GZU8 254 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 MS4A7Q9GZW8 240 aaPredicted RBP8.64□□□□□ -1.03
LIG1-213ENST00000596672 SP140LQ9H930 580 aa8.64□□□□□ -1.03
LIG1-213ENST00000596672 ZNF556Q9HAH1 456 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms