RNA–Protein interactions for RNA: ENST00000596332.1

LIG1-210, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-210ENST00000596332 PCGF3Q3KNV8 242 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 KCTD21Q4G0X4 260 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 PRAMEF6Q5VXH4 476 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 UNQ9370/PRO34162Q6UXP9 181 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 SPNS3Q6ZMD2 512 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 CIARTQ8N365 385 aaPredicted RBP8.92□□□□□ -0.98
LIG1-210ENST00000596332 CELF2-AS1Q8N7Q2 184 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 CSNK2A3Q8NEV1 391 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ORAI1Q96D31 301 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 SMIM19Q96E16 107 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 DIRC2Q96SL1 478 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 TLNRD1Q9H1K6 362 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ISYNA1Q9NPH2 558 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 TREM2Q9NZC2 230 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ITGB1BP2Q9UKP3 347 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 EDARQ9UNE0 448 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ERGIC3Q9Y282 383 aa8.92□□□□□ -0.98
LIG1-210ENST00000596332 ZNF816-ZNF321PA0A0X1KG74 233 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 PLSCR5A0PG75 271 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 ANKRD61A6NGH8 418 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 TMEM212A6NML5 194 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 TNFRSF13BO14836 293 aaPredicted RBP8.91□□□□□ -0.98
LIG1-210ENST00000596332 CDC14BO60729 498 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 LHBP01229 141 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 RIPPLY1Q0D2K3 151 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 Q5PR19 223 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 UBE2UQ5VVX9 321 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 TMEM91Q6ZNR0 172 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 ZNF826PQ6ZT77 177 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 PARP16Q8N5Y8 322 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 OR5AK2Q8NH90 309 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 HAVCR2Q8TDQ0 301 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 PIGCQ92535 297 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 RDH5Q92781 318 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 FGGYQ96C11 551 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 MRPL48Q96GC5 212 aaKnown RBP8.91□□□□□ -0.98
LIG1-210ENST00000596332 MYCBPQ99417 103 aaPredicted RBP8.91□□□□□ -0.98
LIG1-210ENST00000596332 MND1Q9BWT6 205 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 PPIL3Q9H2H8 161 aaKnown RBP8.91□□□□□ -0.98
LIG1-210ENST00000596332 DLL4Q9NR61 685 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 HHLA2Q9UM44 414 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 ZNF281Q9Y2X9 895 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 MPC1Q9Y5U8 109 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 ZANQ9Y493 2812 aa8.91□□□□□ -0.98
LIG1-210ENST00000596332 TRBV5-7A0A0A0MS05 114 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 IGHV1-69-2A0A0G2JMI3 117 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 A0A1B0GVI7 797 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 PQLC2LA1A4F0 135 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 TRIM64BA6NI03 449 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 MYL12BO14950 172 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 MTRF1O75570 445 aaKnown RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 GPX5O75715 221 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 NRASP01111 189 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 IGFBP3P17936 291 aaPredicted RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 CELP19835 753 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CHN2P52757 468 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 SLC3A1Q07837 685 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZNF154Q13106 437 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 GPR50Q13585 617 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 OR8G1Q15617 311 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CLEC12BQ2HXU8 276 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CEACAM21Q3KPI0 293 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZMAT1Q5H9K5 638 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CEP78Q5JTW2 689 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 FAM201AQ5SY85 155 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CLVS2Q5SYC1 327 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 SHEQ5VZ18 495 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZNF773Q6PK81 442 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 UTS2BQ765I0 119 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 LYPD6Q86Y78 171 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZNF676Q8N7Q3 588 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CCDC54Q8NEL0 328 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 OR1M1Q8NGA1 313 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZNF420Q8TAQ5 688 aaPredicted RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 Q8TCH9 128 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 Q96MF0 132 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 MGLLQ99685 303 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ADAT1Q9BUB4 502 aaKnown RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 CHST5Q9GZS9 411 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 SLC22A4Q9H015 551 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 OR51I2Q9H344 312 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 ZNF696Q9H7X3 374 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 SAP30LQ9HAJ7 183 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 BARX1Q9HBU1 254 aaPredicted RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 TRIM36Q9NQ86 728 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 GPR173Q9NS66 373 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 CHCHD3Q9NX63 227 aaKnown RBP8.9□□□□□ -0.98
LIG1-210ENST00000596332 ENPP5Q9UJA9 477 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 LRCH1Q9Y2L9 728 aa8.9□□□□□ -0.98
LIG1-210ENST00000596332 PNMA8CA0A1B0GUJ8 204 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 ANKRD30BLA7E2S9 258 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 VGLL3A8MV65 326 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 TMEM178BH3BS89 294 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 FCN3O75636 299 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 INMTO95050 263 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 ALX3O95076 343 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 SMIM18P0DKX4 95 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 CD37P11049 281 aa8.89□□□□□ -0.99
LIG1-210ENST00000596332 CPEP16870 476 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms