RNA–Protein interactions for RNA: ENST00000595028.1

TRIM28-205, Transcript of tripartite motif containing 28, humanhuman

TSL 2

Gene TRIM28, Length 486 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-205ENST00000595028 ZNF816-ZNF321PA0A0X1KG74 233 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 TMEM210A6NLX4 147 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 LOC110117498-PIK3R3F6TDL0 507 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ATP6V1B1P15313 513 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 MAP2K3P46734 347 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 TMED1Q13445 227 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 TEX36Q5VZQ5 186 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 BTNL3Q6UXE8 466 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ZNF841Q6ZN19 808 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 PLEKHG7Q6ZR37 379 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 KRT74Q7RTS7 529 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 COMMD2Q86X83 199 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 FAM90A1Q86YD7 464 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 C10orf67Q8IYJ2 551 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ZDHHC23Q8IYP9 409 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 OR51E1Q8TCB6 317 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ZNF418Q8TF45 676 aaPredicted RBP12.58□□□□□ -0.4
TRIM28-205ENST00000595028 OR5P3Q8WZ94 311 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ITFG2Q969R8 447 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 APOL4Q9BPW4 351 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 FGF23Q9GZV9 251 aaPredicted RBP12.58□□□□□ -0.4
TRIM28-205ENST00000595028 IMPAD1Q9NX62 359 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 MRM2Q9UI43 246 aaKnown RBP12.58□□□□□ -0.4
TRIM28-205ENST00000595028 R4GMQ9 66 aa12.58□□□□□ -0.4
TRIM28-205ENST00000595028 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 TNFRSF13BO14836 293 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 MAGEB4O15481 346 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 ADAM20O43506 726 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 NDUFA2O43678 99 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 RGS9O75916 674 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 VENTXO95231 258 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 APOL3O95236 402 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 TTRP02766 147 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 NPY4RP50391 375 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 PAX8Q06710 450 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 BCL2L15Q5TBC7 163 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 USP43Q70EL4 1123 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 SSX6Q7RTT6 188 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 CBR4Q8N4T8 237 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 RAB40AQ8WXH6 277 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 PIGCQ92535 297 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 RFKQ969G6 155 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 EME1Q96AY2 570 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 FAM71F1Q96KD3 344 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 HRASLS5Q96KN8 279 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 TECTBQ96PL2 329 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 RAB3IPQ96QF0 476 aaPredicted RBP12.57□□□□□ -0.4
TRIM28-205ENST00000595028 TBX5Q99593 518 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 SLC6A7Q99884 636 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 S100A14Q9HCY8 104 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 GTF2A1LQ9UNN4 478 aa12.57□□□□□ -0.4
TRIM28-205ENST00000595028 IGHV3OR15-7A0A075B7D8 119 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 SRRM5B3KS81 715 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 C22orf46C9J442 243 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 E9PQ18 207 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 CDIPTO14735 213 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 DHRS3O75911 302 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 GYPAP02724 150 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 KRT8P05787 483 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 OR2T7P0C7T2 308 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 PPIAL4GP0DN37 164 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 CFHR2P36980 270 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 HILS1P60008 231 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 ZBTB37Q5TC79 503 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 KCTD8Q6ZWB6 473 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 BPIFB2Q8N4F0 458 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 OR10H4Q8NGA5 316 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 OR10Z1Q8NGY1 313 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 OR2T27Q8NH04 317 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 TRUB1Q8WWH5 349 aaKnown RBP12.56□□□□□ -0.4
TRIM28-205ENST00000595028 RPL3LQ92901 407 aaKnown RBP12.56□□□□□ -0.4
TRIM28-205ENST00000595028 PPP1R14AQ96A00 147 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 NUDT16L1Q9BRJ7 211 aaKnown RBP12.56□□□□□ -0.4
TRIM28-205ENST00000595028 SUCNR1Q9BXA5 334 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 SMURF1Q9HCE7 757 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 ERVK-18Q9QC07 812 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 OR52A1Q9UKL2 312 aa12.56□□□□□ -0.4
TRIM28-205ENST00000595028 KIR2DS1A0A191URI9 304 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 A0A1W2PQL4 384 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 ENSAO43768 121 aaKnown RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 MTRF1O75570 445 aaKnown RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 MUC1P15941 1255 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 FAHP16930 419 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 CFPP27918 469 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 GPM6AP51674 278 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 RIPPLY1Q0D2K3 151 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 MICBQ29980 383 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 ZIK1Q3SY52 487 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 FAM76BQ5HYJ3 339 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 KLF17Q5JT82 389 aaPredicted RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 CEP78Q5JTW2 689 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 THAP5Q7Z6K1 395 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 ELMOD2Q8IZ81 293 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 PQLC1Q8N2U9 271 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 YIPF7Q8N8F6 280 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 SCCPDHQ8NBX0 429 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 UPRTQ96BW1 309 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 C12orf43Q96C57 262 aaKnown RBP12.55□□□□□ -0.4
TRIM28-205ENST00000595028 RNF170Q96K19 258 aa12.55□□□□□ -0.4
TRIM28-205ENST00000595028 HIST1H2AAQ96QV6 131 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms