RNA–Protein interactions for RNA: ENST00000593026.1

DDX39A-221, Transcript of DExD-box helicase 39A, humanhuman

TSL 3

Gene DDX39A, Length 657 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-221ENST00000593026 CDCA4Q9BXL8 241 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 DUSP21Q9H596 190 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 TRIM36Q9NQ86 728 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM106BQ9NUM4 274 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 ERVK-18Q9QC07 812 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 BLOC1S6Q9UL45 172 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 HHLA2Q9UM44 414 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 VPS13CQ709C8 3753 aa12.62□□□□□ -0.39
DDX39A-221ENST00000593026 LOC100289279A0A1B0GTE1 492 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 RGS10O43665 173 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 ZFPL1O95159 310 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 GRPP07492 148 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 RPSAP08865 295 aaKnown RBP12.61□□□□□ -0.39
DDX39A-221ENST00000593026 CDH15P55291 814 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 WNT4P56705 351 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 CLVS2Q5SYC1 327 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 RNLSQ5VYX0 342 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 PLCXD3Q63HM9 321 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 XAF1Q6GPH4 301 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 RPL22L1Q6P5R6 122 aaKnown RBP12.61□□□□□ -0.39
DDX39A-221ENST00000593026 CIARTQ8N365 385 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-221ENST00000593026 NANOGP1Q8N7R0 232 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF485Q8NCK3 441 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 OR5AK2Q8NH90 309 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF420Q8TAQ5 688 aaPredicted RBP12.61□□□□□ -0.39
DDX39A-221ENST00000593026 OR5P3Q8WZ94 311 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 ERGIC1Q969X5 290 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 TIMD4Q96H15 378 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 C18orf12Q96KH6 178 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 COX4I2Q96KJ9 171 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 TMUB1Q9BVT8 246 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 FN3KRPQ9HA64 309 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 UFSP2Q9NUQ7 469 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 DCAF16Q9NXF7 216 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 UBAP1Q9NZ09 502 aa12.61□□□□□ -0.39
DDX39A-221ENST00000593026 DYSFO75923 2080 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 A0A096LNT2 108 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 A6NIN4 97 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 A6NLC8 198 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 LRRC30A6NM36 301 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 SMAD7O15105 426 aaKnown RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 LMX1BO60663 402 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 PTBP3O95758 552 aaKnown RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 LALBAP00709 142 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 NRASP01111 189 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 IRF2P14316 349 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 USF1P22415 310 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 EEF1B2P24534 225 aaKnown RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 TAS2R43P59537 309 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 LOXL1Q08397 574 aaPredicted RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 HNRNPA0Q13151 305 aaKnown RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 MPPED2Q15777 294 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 CEP78Q5JTW2 689 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 AVPI1Q5T686 147 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM42Q69YG0 159 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 KCTD8Q6ZWB6 473 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 MOB3CQ70IA8 216 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 PEG10Q86TG7 708 aaKnown RBP12.6□□□□□ -0.39
DDX39A-221ENST00000593026 OR13C3Q8NGS6 347 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 OR11L1Q8NGX0 322 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 Q8TCH9 128 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 HPSE2Q8WWQ2 592 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 HPS1Q92902 700 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 RAB1CQ92928 201 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 C10orf35Q96D05 121 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 RNF170Q96K19 258 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 PDCD1LG2Q9BQ51 273 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 MND1Q9BWT6 205 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 CCDC90BQ9GZT6 254 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 CELSR1Q9NYQ6 3014 aa12.6□□□□□ -0.39
DDX39A-221ENST00000593026 IGHV4-61A0A0C4DH41 118 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 ANKRD61A6NGH8 418 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 TMEM178BH3BS89 294 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 OGG1O15527 345 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 INHBBP09529 407 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 FOSL1P15407 271 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF20P17024 532 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF154Q13106 437 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 ZNF181Q2M3W8 571 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 CEACAM21Q3KPI0 293 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 WDR86Q86TI4 376 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 C1orf87Q8N0U7 546 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 MAPK1IP1LQ8NDC0 245 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 OR1M1Q8NGA1 313 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 OR51A4Q8NGJ6 313 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 OR10AC1Q8NH08 325 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 RPS4Y2Q8TD47 263 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 PP6455Q8WZ26 134 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 SMIM19Q96E16 107 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 GPR173Q9NS66 373 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 C1orf123Q9NWV4 160 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 WIPI2Q9Y4P8 454 aa12.59□□□□□ -0.39
DDX39A-221ENST00000593026 SIRT4Q9Y6E7 314 aaPredicted RBP12.59□□□□□ -0.39
DDX39A-221ENST00000593026 FLNAP21333 2647 aaKnown RBP12.59□□□□□ -0.39
DDX39A-221ENST00000593026 hCG_1807616A0A1W2PRN6 198 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 ISPDA4D126 451 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 OR5B21A6NL26 309 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 TMEM210A6NLX4 147 aa12.58□□□□□ -0.4
DDX39A-221ENST00000593026 GATBO75879 557 aaKnown RBP12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms