RNA–Protein interactions for RNA: ENST00000592942.1

TRIM47-206, Transcript of tripartite motif containing 47, humanhuman

TSL 2

Gene TRIM47, Length 793 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-206ENST00000592942 ARHGAP32A7KAX9 2087 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 TNFRSF13BO14836 293 aaPredicted RBP12.84□□□□□ -0.35
TRIM47-206ENST00000592942 LMX1BO60663 402 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 DHRS3O75911 302 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 FADS2O95864 444 aaKnown RBP12.84□□□□□ -0.35
TRIM47-206ENST00000592942 LIMS3P0CW19 117 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 LIMS4P0CW20 117 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 MYF6P23409 242 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 RIPPLY1Q0D2K3 151 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 ZNF154Q13106 437 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 TMEM155Q4W5P6 130 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 DMRTC1Q5HYR2 192 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 ZBTB37Q5TC79 503 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 TMEM42Q69YG0 159 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 RDH10Q8IZV5 341 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 SEMA6DQ8NFY4 1073 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 OR2G2Q8NGZ5 317 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 PELI1Q96FA3 418 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 PAPOLGQ9BWT3 736 aaKnown RBP12.84□□□□□ -0.35
TRIM47-206ENST00000592942 JAM3Q9BX67 310 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 TLNRD1Q9H1K6 362 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 GTF2A1LQ9UNN4 478 aa12.84□□□□□ -0.35
TRIM47-206ENST00000592942 SONP18583 2426 aaKnown RBP12.84□□□□□ -0.35
TRIM47-206ENST00000592942 NSD1Q96L73 2696 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PPIAL4EA0A075B759 164 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 ZNF816-ZNF321PA0A0X1KG74 233 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 B4DSR2 109 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 F5H0A9 414 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PPIAL4DF5H284 164 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 J3QLW9 94 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PPIAL4FP0DN26 164 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 FAHP16930 419 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 ZNF19P17023 458 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 CSNK2BP67870 215 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 ODF4Q2M2E3 257 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 KLHL22Q53GT1 634 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 FAM166AQ6J272 317 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 EGFL6Q8IUX8 553 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 C8orf59Q8N0T1 100 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 C19orf18Q8NEA5 215 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 OR8S1Q8NH09 359 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 GGHQ92820 318 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 C4orf36Q96KX1 117 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 GAL3ST1Q99999 423 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 TMEM246Q9BRR3 403 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 ALG8Q9BVK2 526 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 METTL17Q9H7H0 456 aaPredicted RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 FN3KRPQ9HA64 309 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PATZ1Q9HBE1 687 aaKnown RBP12.83□□□□□ -0.36
TRIM47-206ENST00000592942 C14orf119Q9NWQ9 140 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 C1orf123Q9NWV4 160 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 TMEM160Q9NX00 188 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 RNF7Q9UBF6 113 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PIGLQ9Y2B2 252 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 PPIAL4AQ9Y536 164 aa12.83□□□□□ -0.36
TRIM47-206ENST00000592942 CUBNO60494 3623 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 ISPDA4D126 451 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 A6NIN4 97 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 E9PI62 339 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 PLPP2O43688 288 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 CRLF1O75462 422 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 MTRF1O75570 445 aaKnown RBP12.82□□□□□ -0.36
TRIM47-206ENST00000592942 WNT2P09544 360 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 ZFP36P26651 326 aaKnown RBP12.82□□□□□ -0.36
TRIM47-206ENST00000592942 CFHR2P36980 270 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 GNALP38405 381 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 MDH2P40926 338 aaKnown RBP12.82□□□□□ -0.36
TRIM47-206ENST00000592942 DVL1P1P54792 670 aaPredicted RBP12.82□□□□□ -0.36
TRIM47-206ENST00000592942 MZT1Q08AG7 82 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 CEACAM21Q3KPI0 293 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 ZNF404Q494X3 552 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 WDR82Q6UXN9 313 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 DOK3Q7L591 496 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 THAP5Q7Z6K1 395 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 SYS1Q8N2H4 156 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 FTMTQ8N4E7 242 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 GCSAMQ8N6F7 178 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 RNF170Q96K19 258 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 MICU1Q9BPX6 476 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 INPP5EQ9NRR6 644 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 UBAP1Q9NZ09 502 aa12.82□□□□□ -0.36
TRIM47-206ENST00000592942 LRRC30A6NM36 301 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 OR4C45A6NMZ5 311 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 DHRS7CA6NNS2 312 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 CEACAM18A8MTB9 384 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 C3orf80F5H4A9 247 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 H3BSH0 61 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 CDIPTO14735 213 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 ISG15P05161 165 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 MSMBP08118 114 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 EGR1P18146 543 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 DCKP27707 260 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 ETV1P50549 477 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 CCR9P51686 369 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 SEC61A1P61619 476 aaKnown RBP12.81□□□□□ -0.36
TRIM47-206ENST00000592942 MED21Q13503 144 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 CEP78Q5JTW2 689 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 LYPD2Q6UXB3 125 aa12.81□□□□□ -0.36
TRIM47-206ENST00000592942 MOB3CQ70IA8 216 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms