RNA–Protein interactions for RNA: ENST00000591849.5

BRCA1-227, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-227ENST00000591849 TMEM246Q9BRR3 403 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 VCXQ9H320 206 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 OR5V1Q9UGF6 321 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 PIGLQ9Y2B2 252 aa8.46□□□□□ -1.06
BRCA1-227ENST00000591849 RPL36Q9Y3U8 105 aaKnown RBP8.46□□□□□ -1.06
BRCA1-227ENST00000591849 TMEM210A6NLX4 147 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 J3QLI3 93 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 J3QLW9 94 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 NDUFA2O43678 99 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 DHRS3O75911 302 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 FADS2O95864 444 aaKnown RBP8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF19P17023 458 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 GATA3P23771 443 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ACKR3P25106 362 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 PITPNBP48739 271 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 GMFBP60983 142 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 KLHL22Q53GT1 634 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF684Q5T5D7 378 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 DOK3Q7L591 496 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 SSX6Q7RTT6 188 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 PRIMA1Q86XR5 153 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ENTHD1Q8IYW4 607 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ELMOD2Q8IZ81 293 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 DHRSXQ8N5I4 330 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ACBD7Q8N6N7 88 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 PACRGLQ8N7B6 248 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 OR1M1Q8NGA1 313 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 OR5P3Q8WZ94 311 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 SSBP3Q9BWW4 388 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-227ENST00000591849 C7orf69Q9H7B7 122 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 METTL17Q9H7H0 456 aaPredicted RBP8.45□□□□□ -1.06
BRCA1-227ENST00000591849 RNPEPL1Q9HAU8 725 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 PLEKHA1Q9HB21 404 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 AMBNQ9NP70 447 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 ERVK-18Q9QC07 812 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 DNAJB11Q9UBS4 358 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 AASSQ9UDR5 926 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 METRNQ9UJH8 293 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 SLC22A13Q9Y226 551 aa8.45□□□□□ -1.06
BRCA1-227ENST00000591849 OOEPA6NGQ2 149 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF732B4DXR9 585 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 H3BSH0 61 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CDIPTO14735 213 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 SLC16A6O15403 523 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 PHF1O43189 567 aaPredicted RBP8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ADAM20O43506 726 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 SYT7O43581 403 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 PTBP3O95758 552 aaKnown RBP8.44□□□□□ -1.06
BRCA1-227ENST00000591849 SERPINA3P01011 423 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 NRASP01111 189 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 TTRP02766 147 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 HTR1AP08908 422 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 WNT2P09544 360 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 FAHP16930 419 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF12P17014 697 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 PSMB10P40306 273 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 GPM6AP51674 278 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 GNG3P63215 75 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CSNK2BP67870 215 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF85Q03923 595 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF91Q05481 1191 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF154Q13106 437 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 MICBQ29980 383 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CEACAM21Q3KPI0 293 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF404Q494X3 552 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CEP78Q5JTW2 689 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CLVS2Q5SYC1 327 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZBTB37Q5TC79 503 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 BTNL3Q6UXE8 466 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 DCDC5Q6ZRR9 648 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 LHFPL3Q86UP9 236 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 SETD9Q8NE22 299 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 ZNF671Q8TAW3 534 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 RPL3LQ92901 407 aaKnown RBP8.44□□□□□ -1.06
BRCA1-227ENST00000591849 LGALS12Q96DT0 336 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 TECTBQ96PL2 329 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 MRI1Q9BV20 369 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 OCEL1Q9H607 264 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 PPP1R3EQ9H7J1 279 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 G6PC2Q9NQR9 355 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 CLN8Q9UBY8 286 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 SLC7A11Q9UPY5 501 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 EXOGQ9Y2C4 368 aaKnown RBP8.44□□□□□ -1.06
BRCA1-227ENST00000591849 LRCH1Q9Y2L9 728 aa8.44□□□□□ -1.06
BRCA1-227ENST00000591849 IGHV3OR15-7A0A075B7D8 119 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 KIAA1324LA8MWY0 1029 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 H0YHG0 523 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 SRSF10O75494 262 aaKnown RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 FSTL3O95633 263 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 GYPAP02724 150 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 OCM2P0CE71 109 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 OCMP0CE72 109 aaPredicted RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 DBTP11182 482 aaKnown RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 ZFP36P26651 326 aaKnown RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 PEX2P28328 305 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 THBS2P35442 1172 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 OR12D2P58182 307 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 SEC61A1P61619 476 aaKnown RBP8.43□□□□□ -1.06
BRCA1-227ENST00000591849 ACTA2P62736 377 aa8.43□□□□□ -1.06
BRCA1-227ENST00000591849 ACTG2P63267 376 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms