RNA–Protein interactions for RNA: ENST00000589677.5

SMARCA4-214, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SMARCA4, Length 5,181 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-214ENST00000589677 NRASP01111 189 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 HMGA1P17096 107 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ERVFC1-1P60608 527 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ZNF154Q13106 437 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 OR2T10Q8NGZ9 312 aa13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 NOSIPQ9Y314 301 aaKnown RBP13.15□□□□□ -0.3
SMARCA4-214ENST00000589677 ZNF17P17021 662 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 P2RY1P47900 373 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 DEFB133Q30KQ1 61 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 OR5C1Q8NGR4 320 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 PP6455Q8WZ26 134 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 MAP1LC3B2A6NCE7 125 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 GABRA4P48169 554 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 WDR34Q96EX3 536 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 NRIP2Q9BQI9 281 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 MAP1LC3BQ9GZQ8 125 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 CA10Q9NS85 328 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 SLX4Q8IY92 1834 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM74A7A6NL05 159 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 GUSBP08236 651 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 EN2P19622 333 aaPredicted RBP13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM74A3Q4VXF1 159 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 Q6ZN92 141 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 PUSL1Q8N0Z8 303 aaKnown RBP13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 BADQ92934 168 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 SLC17A4Q9Y2C5 497 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 A0A1W2PPE2 198 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 DVL1O14640 695 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 HS3ST1O14792 307 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 SLC37A1P57057 533 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 DLK1P80370 383 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 CA13Q8N1Q1 262 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 OSR2Q8N2R0 312 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 SLC35E1Q96K37 410 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 SNX22Q96L94 193 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 DMRT1Q9Y5R6 373 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 ADAMTS7Q9UKP4 1686 aa13.14□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF737O75373 536 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 TIMP1P01033 207 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 BSXQ3C1V8 233 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 WDR73Q6P4I2 378 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 NAA60Q9H7X0 242 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 C20orf141Q9NUB4 165 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 BOKQ9UMX3 212 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 PTRH2Q9Y3E5 179 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 CXorf51AA0A1B0GTR3 108 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 PTP4A3O75365 173 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 GZMMP51124 257 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 TMEM91Q6ZNR0 172 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF775Q96BV0 537 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 LSM2Q9Y333 95 aaKnown RBP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM221AA4D161 298 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF732B4DXR9 585 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 AQP7O14520 342 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 WDR1O75083 606 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 PXNP49023 591 aaPredicted RBP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 GUCA2BQ16661 112 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 GOLT1BQ9Y3E0 138 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 SUB1P53999 127 aaKnown RBP eCLIP13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 SHBQ15464 509 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 DEGS2Q6QHC5 323 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 DRAM2Q6UX65 266 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 DGAT2L6Q6ZPD8 337 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 NHLRC2Q8NBF2 726 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 OR4D9Q8NGE8 314 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 NAT8BQ9UHF3 227 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 IL17BQ9UHF5 180 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 TIMM10BQ9Y5J6 103 aa13.13□□□□□ -0.31
SMARCA4-214ENST00000589677 FOXO1Q12778 655 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 SP6Q3SY56 376 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 MORN4Q8NDC4 146 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 TMEM104Q8NE00 496 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ERGIC1Q969X5 290 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ST3GAL6Q9Y274 331 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 CCL27Q9Y4X3 112 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 IGLV3-16A0A075B6K0 115 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 UBE2L5PA0A1B0GUS4 154 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ONECUT2O95948 504 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF121P58317 390 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 RPS4Y2Q8TD47 263 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 DYRK2Q92630 601 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 TRMT61AQ96FX7 289 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 CCL26Q9Y258 94 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 AMDHD2Q9Y303 409 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 MASP2O00187 686 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ABCD4O14678 606 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 C9orf135Q5VTT2 229 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ZNF660Q6AZW8 331 aaPredicted RBP13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 NT5CQ8TCD5 201 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 MYEOVQ96EZ4 313 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ARHGAP5-AS1Q96IT6 56 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 ADGRG7Q96K78 797 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 FAM234AQ9H0X4 552 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 DDX60LQ5H9U9 1706 aaKnown RBP13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 TAF1P21675 1872 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 NPIPB8E9PQR5 432 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 H3BQ15 152 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 FCN1O00602 326 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 FFAR1O14842 300 aa13.12□□□□□ -0.31
SMARCA4-214ENST00000589677 HLA-DQB1P01920 261 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms