RNA–Protein interactions for RNA: ENST00000588692.5

DDX39A-208, Transcript of DExD-box helicase 39A, humanhuman

TSL 5

Gene DDX39A, Length 1,478 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-208ENST00000588692 CDIPTO14735 213 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 PLATP00750 562 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 EGR1P18146 543 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 ACTR3P61158 418 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 ZDHHC23Q8IYP9 409 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 ZDHHC22Q8N966 263 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 OR10Z1Q8NGY1 313 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 OR5P3Q8WZ94 311 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 GABARAPL3Q9BY60 117 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 MS4A7Q9GZW8 240 aaPredicted RBP12.01□□□□□ -0.49
DDX39A-208ENST00000588692 PBOV1Q9GZY1 135 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 ADGRL4Q9HBW9 690 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 ESM1Q9NQ30 184 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 CLN6Q9NWW5 311 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 NUFIP1Q9UHK0 495 aaKnown RBP12.01□□□□□ -0.49
DDX39A-208ENST00000588692 OAZ3Q9UMX2 235 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 COPS3Q9UNS2 423 aa12.01□□□□□ -0.49
DDX39A-208ENST00000588692 TRAV40A0A0B4J280 105 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 PRR32B1ATL7 298 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 ZNF670-ZNF695F2Z2N8 137 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 M0R129 80 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 PSMD9O00233 223 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 TMPRSS2O15393 492 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 ECDO95905 644 aaPredicted RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 IGLV3-1P01715 115 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 GYPAP02724 150 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 IGHV4-38-2P0DP08 117 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 MTNR1AP48039 350 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 BPIFB3P59826 476 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 CXCR4P61073 352 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 UBA52P62987 128 aaKnown RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 FAM76BQ5HYJ3 339 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 ZBTB37Q5TC79 503 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 ZNF322Q6U7Q0 402 aaPredicted RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 C12orf54Q6X4T0 127 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 BCDIN3DQ7Z5W3 292 aaKnown RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 COMMD2Q86X83 199 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 SLC35F2Q8IXU6 374 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 SIGLECL1Q8N7X8 197 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 PNLDC1Q8NA58 520 aaKnown RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 PIGCQ92535 297 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 HIST1H2AAQ96QV6 131 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 IL4I1Q96RQ9 567 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 RBM4BQ9BQ04 359 aaKnown RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 SEMA6AQ9H2E6 1030 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 SMURF1Q9HCE7 757 aa12□□□□□ -0.49
DDX39A-208ENST00000588692 WARS2Q9UGM6 360 aaKnown RBP12□□□□□ -0.49
DDX39A-208ENST00000588692 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-208ENST00000588692 HAX1O00165 279 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 DVL1O14640 695 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 FGF12P61328 243 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 EGR3Q06889 387 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 POU4F2Q12837 409 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 SLC36A1Q7Z2H8 476 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 HPSE2Q8WWQ2 592 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 GCDHQ92947 438 aaPredicted RBP11.99□□□□□ -0.49
DDX39A-208ENST00000588692 RNF170Q96K19 258 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 TTTY10Q9BZA0 68 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 DNTTIP1Q9H147 329 aa11.99□□□□□ -0.49
DDX39A-208ENST00000588692 IGHV3OR15-7A0A075B7D8 119 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 TMEM89A2RUT3 159 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 ZNF879B4DU55 563 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 LOC110117498-PIK3R3F6TDL0 507 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 MTRF1O75570 445 aaKnown RBP11.98□□□□□ -0.49
DDX39A-208ENST00000588692 DHRS3O75911 302 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 GNG3P63215 75 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 RIPPLY1Q0D2K3 151 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 TMED1Q13445 227 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 WDR38Q5JTN6 314 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 GPR157Q5UAW9 335 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 ZFP1Q6P2D0 407 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 CCDC121Q6ZUS5 278 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 KCTD8Q6ZWB6 473 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 THAP5Q7Z6K1 395 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 BCL6BQ8N143 479 aaPredicted RBP11.98□□□□□ -0.49
DDX39A-208ENST00000588692 SCCPDHQ8NBX0 429 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 OR8J1Q8NGP2 316 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 OR51E1Q8TCB6 317 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 RIBC2Q9H4K1 309 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 GPR84Q9NQS5 396 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 DNAJB11Q9UBS4 358 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 R4GMQ9 66 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 TENM1Q9UKZ4 2725 aa11.98□□□□□ -0.49
DDX39A-208ENST00000588692 DNAJC9-AS1A6NH13 148 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 SAC3D1A6NKF1 404 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 OR5B21A6NL26 309 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 P2RY10O00398 339 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 GPR37O15354 613 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 SRSF10O75494 262 aaKnown RBP11.97□□□□□ -0.49
DDX39A-208ENST00000588692 TTRP02766 147 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 PRTN3P24158 256 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 HTR1FP30939 366 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 MFGE8Q08431 387 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-208ENST00000588692 BAMBIQ13145 260 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 CEACAM21Q3KPI0 293 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 BCL2L15Q5TBC7 163 aa11.97□□□□□ -0.49
DDX39A-208ENST00000588692 ATPAF1Q5TC12 328 aaPredicted RBP11.97□□□□□ -0.49
DDX39A-208ENST00000588692 STUMQ69YW2 141 aa11.97□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms