RNA–Protein interactions for RNA: ENST00000588667.5

ATG4D-208, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,619 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-208ENST00000588667 AP3S1Q92572 193 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 PPP1R14AQ96A00 147 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 SORCS2Q96PQ0 1159 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 BARHL1Q9BZE3 327 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 RAB1BQ9H0U4 201 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 MS4A5Q9H3V2 200 aa17.21■□□□□ 0.35
ATG4D-208ENST00000588667 A0A075B6Q4 140 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 A0A1W2PPK0 400 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 ERCC1P07992 297 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-208ENST00000588667 SOX2P48431 317 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 EFNA4P52798 201 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 FBXW12Q6X9E4 464 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 NAA40Q86UY6 237 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 C6orf62Q9GZU0 229 aaPredicted RBP17.2■□□□□ 0.34
ATG4D-208ENST00000588667 SLITRK2Q9H156 845 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 PTTG3PQ9NZH4 202 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 DHDHQ9UQ10 334 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 F8P00451 2351 aa17.2■□□□□ 0.34
ATG4D-208ENST00000588667 LOC107986453A0A1B0GWG9 222 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 TTRP02766 147 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 CD2P06729 351 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 ANXA2P07355 339 aaKnown RBP17.19■□□□□ 0.34
ATG4D-208ENST00000588667 RAC2P15153 192 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 CFL1P23528 166 aaKnown RBP17.19■□□□□ 0.34
ATG4D-208ENST00000588667 TMEM255AQ5JRV8 349 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 OR51A4Q8NGJ6 313 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 OR6Q1Q8NGQ2 317 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 OR10AC1Q8NH08 325 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 TMEM106AQ96A25 262 aa17.19■□□□□ 0.34
ATG4D-208ENST00000588667 CGGBP1Q9UFW8 167 aaPredicted RBP17.19■□□□□ 0.34
ATG4D-208ENST00000588667 TRBV5-7A0A0A0MS05 114 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PIN1P1O15428 100 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 F12P00748 615 aaPredicted RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 SRMP19623 302 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 KITLGP21583 273 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 S100A5P33763 92 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 MALLQ13021 153 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PSG7Q13046 419 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 ZCCHC24Q8N2G6 241 aaKnown RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 WFDC11Q8NEX6 87 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 TCF7L1Q9HCS4 588 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PEX16Q9Y5Y5 336 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PLSCR5A0PG75 271 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 SMIM30A4D0T7 59 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PDCD5O14737 125 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 TIMM8AO60220 97 aaPredicted RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 SLC2A1P11166 492 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 NAT2P11245 290 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 RAB3BP20337 219 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 MMP15P51511 669 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 BMXP51813 675 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 HLXQ14774 488 aaPredicted RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 SNAI3Q3KNW1 292 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 ALKBH6Q3KRA9 238 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 FAM57BQ71RH2 274 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 OR8B12Q8NGG6 310 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 NEU4Q8WWR8 484 aaPredicted RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 HAVCR1Q96D42 359 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 CMBLQ96DG6 245 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 SP140LQ9H930 580 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 CYSLTR2Q9NS75 346 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 PURGQ9UJV8 347 aaKnown RBP17.18■□□□□ 0.34
ATG4D-208ENST00000588667 N6AMT1Q9Y5N5 214 aa17.18■□□□□ 0.34
ATG4D-208ENST00000588667 ZNF469Q96JG9 3925 aaPredicted RBP17.17■□□□□ 0.34
ATG4D-208ENST00000588667 HIVEP1P15822 2718 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 ACANP16112 2415 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 A0A1B0GVI7 797 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 C17orf100A8MU93 164 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 P2RY10O00398 339 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 MAGEB1P43366 347 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 PRSS45Q7RTY3 260 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 OR13C3Q8NGS6 347 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 S100ZQ8WXG8 99 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 PGAM5Q96HS1 289 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 SMURF1Q9HCE7 757 aa17.17■□□□□ 0.34
ATG4D-208ENST00000588667 H3BSH0 61 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 SYT7O43581 403 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 SSX4O60224 188 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 NCR1O76036 304 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 CAV3P56539 151 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 GK2Q14410 553 aaPredicted RBP17.16■□□□□ 0.34
ATG4D-208ENST00000588667 TGIF2LYQ8IUE0 185 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 OR52H1Q8NGJ2 320 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 CKLFQ9UBR5 152 aa17.16■□□□□ 0.34
ATG4D-208ENST00000588667 LY6HO94772 140 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 ANOS1P23352 680 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 ZNF81P51508 661 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 CLEC12BQ2HXU8 276 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 PCGF3Q3KNV8 242 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 DNM1P46Q6ZS02 220 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 COMMD2Q86X83 199 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 OR51E1Q8TCB6 317 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 ZFAND2BQ8WV99 257 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 ACOT12Q8WYK0 555 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 Q96MF0 132 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 OPA3Q9H6K4 179 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 HMG20AQ9NP66 347 aa17.15■□□□□ 0.34
ATG4D-208ENST00000588667 A0A0U1RQV5 110 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 NOTOA8MTQ0 251 aa17.14■□□□□ 0.33
ATG4D-208ENST00000588667 XRCC2O43543 280 aa17.14■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms