RNA–Protein interactions for RNA: ENST00000587260.1

NFIX-208, Transcript of nuclear factor I X, humanhuman

TSL 1 (best) BASIC

Gene NFIX, Length 1,537 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFIX-208ENST00000587260 OR51A2Q8NGJ7 313 aa12.78□□□□□ -0.36
NFIX-208ENST00000587260 CMBLQ96DG6 245 aa12.78□□□□□ -0.36
NFIX-208ENST00000587260 TECTBQ96PL2 329 aa12.78□□□□□ -0.36
NFIX-208ENST00000587260 DUSP13Q9UII6 198 aa12.78□□□□□ -0.36
NFIX-208ENST00000587260 IGKV1-9A0A0C4DH69 117 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 GMDSO60547 372 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 MAS1P04201 325 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 PRF1P14222 555 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 ZNF250P15622 560 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 ATF1P18846 271 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 KITLGP21583 273 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 BDKRB2P30411 391 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 CAV3P56539 151 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 OR10A3P58181 314 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 DYNC1I2Q13409 638 aaKnown RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 UBE2V2Q15819 145 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 ZNF404Q494X3 552 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 HIST2H2BCQ6DN03 193 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 OR2T2Q6IF00 324 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 LRP11Q86VZ4 500 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 OR13C9Q8NGT0 318 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 UBASH3BQ8TF42 649 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 FOXRED1Q96CU9 486 aaPredicted RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 KCTD12Q96CX2 325 aaKnown RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 MRPL37Q9BZE1 423 aaKnown RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 MMP27Q9H306 513 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 ZNF442Q9H7R0 627 aa12.77□□□□□ -0.37
NFIX-208ENST00000587260 CISD1Q9NZ45 108 aaKnown RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 MYEF2Q9P2K5 600 aaKnown RBP12.77□□□□□ -0.37
NFIX-208ENST00000587260 PLCE1Q9P212 2302 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 PKDREJQ9NTG1 2253 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 ANXA2P2A6NMY6 339 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 IFITM5A6NNB3 132 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 IQCF6A8MYZ5 107 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 AIPO00170 330 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 CLPXO76031 633 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 NCR1O76036 304 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 OR4A8P0C604 315 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 PSG7Q13046 419 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 ADIPOQQ15848 244 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 ALKBH6Q3KRA9 238 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 GLT8D1Q68CQ7 371 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 FAM166AQ6J272 317 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 TMEM200AQ86VY9 491 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 SYNPRQ8TBG9 265 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 AP3S1Q92572 193 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 MRPL24Q96A35 216 aaKnown RBP12.76□□□□□ -0.37
NFIX-208ENST00000587260 SPSB1Q96BD6 273 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 UBTD1Q9HAC8 227 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 MRPL15Q9P015 296 aaKnown RBP12.76□□□□□ -0.37
NFIX-208ENST00000587260 RHBDD3Q9Y3P4 386 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 CMAHPQ9Y471 501 aa12.76□□□□□ -0.37
NFIX-208ENST00000587260 RAI1Q7Z5J4 1906 aaPredicted RBP12.75□□□□□ -0.37
NFIX-208ENST00000587260 SMIM30A4D0T7 59 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 TIMM8AO60220 97 aaPredicted RBP12.75□□□□□ -0.37
NFIX-208ENST00000587260 LILRA1O75019 489 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 NRASP01111 189 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 THBS2P35442 1172 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 KLF3P57682 345 aaPredicted RBP12.75□□□□□ -0.37
NFIX-208ENST00000587260 C1orf100Q5SVJ3 147 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 DNAAF1Q8NEP3 725 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 MCFD2Q8NI22 146 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 ACOT12Q8WYK0 555 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 FBXW5Q969U6 566 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 UQCC2Q9BRT2 126 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 MRI1Q9BV20 369 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 CLEC4MQ9H2X3 399 aaPredicted RBP12.75□□□□□ -0.37
NFIX-208ENST00000587260 PLK3Q9H4B4 646 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 NEK6Q9HC98 313 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 PURGQ9UJV8 347 aaKnown RBP12.75□□□□□ -0.37
NFIX-208ENST00000587260 MPC1Q9Y5U8 109 aa12.75□□□□□ -0.37
NFIX-208ENST00000587260 SETXQ7Z333 2677 aaKnown RBP12.74□□□□□ -0.37
NFIX-208ENST00000587260 IGLV3-9A0A075B6K5 115 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 A0A1B0GWJ7 208 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 ANKRD30BLA7E2S9 258 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 CTAG2O75638 210 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 GOSR1O95249 250 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 IGHV3-13P01766 116 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 PRKACBP22694 351 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 CNN3Q15417 329 aaKnown RBP12.74□□□□□ -0.37
NFIX-208ENST00000587260 OR52N4Q8NGI2 321 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 PIGCQ92535 297 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 DVL3Q92997 716 aaPredicted RBP12.74□□□□□ -0.37
NFIX-208ENST00000587260 DHRS9Q9BPW9 319 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 METTL17Q9H7H0 456 aaPredicted RBP12.74□□□□□ -0.37
NFIX-208ENST00000587260 ABCB9Q9NP78 766 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 ABRACLQ9P1F3 81 aa12.74□□□□□ -0.37
NFIX-208ENST00000587260 SLC17A2O00624 439 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 HS3ST1O14792 307 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 MAGEB3O15480 346 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 AZGP1P25311 298 aaKnown RBP12.73□□□□□ -0.37
NFIX-208ENST00000587260 RANBP1P43487 201 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 FUT6P51993 359 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 SCAND1P57086 179 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 RIN1Q13671 783 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 IDNKQ5T6J7 187 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 OR8G5Q8NG78 346 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 OR6M1Q8NGM8 313 aa12.73□□□□□ -0.37
NFIX-208ENST00000587260 GTF3AQ92664 365 aaKnown RBP12.73□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms