RNA–Protein interactions for RNA: ENST00000585540.1

PRKCSH-202, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 3

Gene PRKCSH, Length 501 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-202ENST00000585540 PATZ1Q9HBE1 687 aaKnown RBP11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 GPR84Q9NQS5 396 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 MIOXQ9UGB7 285 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 SLC22A13Q9Y226 551 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 MYRFQ9Y2G1 1151 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 POLR3KQ9Y2Y1 108 aaPredicted RBP11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 CACNG2Q9Y698 323 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 V9GYS6 101 aa11.63□□□□□ -0.55
PRKCSH-202ENST00000585540 TRAV38-1A0A0B4J264 116 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 J3QLI3 93 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 FAM20BO75063 409 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 TGFAP01135 160 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 NPY4RP50391 375 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 GNG3P63215 75 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 PRDX4Q13162 271 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 ZNF404Q494X3 552 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 TP53I3Q53FA7 332 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 FAM76BQ5HYJ3 339 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 AVPI1Q5T686 147 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 DCDC5Q6ZRR9 648 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 NLRC3Q7RTR2 1065 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 OR5A2Q8NGI9 324 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 OR51E1Q8TCB6 317 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 TMEM186Q96B77 213 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 C12orf43Q96C57 262 aaKnown RBP11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 ANKRD60Q9BZ19 345 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 PLEKHA1Q9HB21 404 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 FGF20Q9NP95 211 aaPredicted RBP11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 GNG8Q9UK08 70 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 GTF2A1LQ9UNN4 478 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 RHBDD3Q9Y3P4 386 aa11.62□□□□□ -0.55
PRKCSH-202ENST00000585540 A6NLC8 198 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 INAFM1C9JVW0 142 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 F5H0A9 414 aaPredicted RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 LGALS8O00214 317 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 SYT7O43581 403 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 XPNPEP2O43895 674 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 GATBO75879 557 aaKnown RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 RPP14O95059 124 aaKnown RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 PNPP00491 289 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ISG15P05161 165 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 HTR1AP08908 422 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CCDC159P0C7I6 412 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 PIPP12273 146 aaPredicted RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 MYF6P23409 242 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ACKR3P25106 362 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 HSPA13P48723 471 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CSNK2BP67870 215 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ZNF154Q13106 437 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CEACAM21Q3KPI0 293 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CHRFAM7AQ494W8 412 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ESCO2Q56NI9 601 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 SPRNQ5BIV9 151 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CLVS2Q5SYC1 327 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 OR1M1Q8NGA1 313 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ZNF420Q8TAQ5 688 aaPredicted RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 OR5P3Q8WZ94 311 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 PIGCQ92535 297 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 RORBQ92753 470 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ZNF649Q9BS31 505 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 SOX7Q9BT81 388 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ALG8Q9BVK2 526 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 SHARPINQ9H0F6 387 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 ACOXLQ9NUZ1 547 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 TREM2Q9NZC2 230 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 CNOT2Q9NZN8 540 aaKnown RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 EXOSC1Q9Y3B2 195 aaKnown RBP11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 C2CD3Q4AC94 2353 aa11.61□□□□□ -0.55
PRKCSH-202ENST00000585540 TLN2Q9Y4G6 2542 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 A0A0G2JMP0 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 A0A0X1KG70 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 CEACAM18A8MTB9 384 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 CYB5R3P00387 301 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 SERPINA3P01011 423 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 MUC1P15941 1255 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 MYL12AP19105 171 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 IL2RGP31785 369 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 THBS2P35442 1172 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 TGM4P49221 684 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 ZMYND11Q15326 602 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 PRAMEF6Q5VXH4 476 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 TMEM42Q69YG0 159 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 LHFPL3Q86UP9 236 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 BPIFB6Q8NFQ5 453 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 OR4M2Q8NGB6 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 OR8B3Q8NGG8 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 OR14K1Q8NGZ2 314 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 OR2G2Q8NGZ5 317 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 PP6455Q8WZ26 134 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 GGHQ92820 318 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 PPP1R14AQ96A00 147 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 NEIL1Q96FI4 390 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 FAM71F1Q96KD3 344 aaPredicted RBP11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 OR8B2Q96RD0 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 DNTTIP1Q9H147 329 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 NARFLQ9H6Q4 476 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 NEK6Q9HC98 313 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 CHCHD3Q9NX63 227 aaKnown RBP11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 ERVK13-1Q9NX77 482 aa11.6□□□□□ -0.55
PRKCSH-202ENST00000585540 CAB39Q9Y376 341 aaPredicted RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms