RNA–Protein interactions for RNA: ENST00000585370.1

LIG3-203, Transcript of DNA ligase 3, humanhuman

TSL 3

Gene LIG3, Length 235 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG3-203ENST00000585370 OR5M9Q8NGP3 310 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MBD3L2Q8NHZ7 208 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 KCNG3Q8TAE7 436 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 ENKURQ8TC29 256 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 SLC7A6Q92536 515 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 YIPF5Q969M3 257 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 TRIM63Q969Q1 353 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MARVELD3Q96A59 401 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 C11orf54Q9H0W9 315 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 CNTD2Q9H8S5 307 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 MOV10Q9HCE1 1003 aaKnown RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 OBP2BQ9NPH6 170 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 B3GNT2Q9NY97 397 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 TAS2R8Q9NYW2 309 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 COPZ2Q9P299 210 aa9.02□□□□□ -0.97
LIG3-203ENST00000585370 CGGBP1Q9UFW8 167 aaPredicted RBP9.02□□□□□ -0.97
LIG3-203ENST00000585370 ZFHX3Q15911 3703 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 FAM240BA0A1B0GVZ2 78 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 CIB4A0PJX0 185 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 GGT3PA6NGU5 568 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 A6NIN4 97 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 E9PLN8 166 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 WISP2O76076 250 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 IL18BPO95998 194 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 IL2RAP01589 272 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 HLA-HP01893 362 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 TIMP3P35625 211 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 RFX2P48378 723 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 UBE2NP61088 152 aaKnown RBP9.01□□□□□ -0.97
LIG3-203ENST00000585370 P2RY6Q15077 328 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 OR8B8Q15620 311 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 SNAI3Q3KNW1 292 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 TBRG1Q3YBR2 411 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 CLVS2Q5SYC1 327 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 C9orf135Q5VTT2 229 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 ZNF585AQ6P3V2 769 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 PLET1Q6UQ28 207 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 BEND4Q6ZU67 534 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 KRT74Q7RTS7 529 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 CDH24Q86UP0 819 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 ANGPTL5Q86XS5 388 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 C17orf78Q8N4C9 275 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 C9orf106Q8NAJ2 232 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 PIGTQ969N2 578 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 FAM46BQ96A09 425 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 POM121L2Q96KW2 1035 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 ATG5Q9H1Y0 275 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 SCPEP1Q9HB40 452 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 PCDHB16Q9NRJ7 776 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 PROCRQ9UNN8 238 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 RBMX2Q9Y388 322 aaKnown RBP9.01□□□□□ -0.97
LIG3-203ENST00000585370 RHBDD3Q9Y3P4 386 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 CACNG2Q9Y698 323 aa9.01□□□□□ -0.97
LIG3-203ENST00000585370 LOC100509620A0A075B734 347 aa9□□□□□ -0.97
LIG3-203ENST00000585370 ZNF816-ZNF321PA0A0X1KG74 233 aa9□□□□□ -0.97
LIG3-203ENST00000585370 hCG_38984A0A1B0GV85 526 aa9□□□□□ -0.97
LIG3-203ENST00000585370 TMEM14DPA8MWL7 114 aa9□□□□□ -0.97
LIG3-203ENST00000585370 PRSS44E7EML9 344 aa9□□□□□ -0.97
LIG3-203ENST00000585370 RBBP9O75884 186 aa9□□□□□ -0.97
LIG3-203ENST00000585370 TUBG1P23258 451 aa9□□□□□ -0.97
LIG3-203ENST00000585370 GRNP28799 593 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 PRSS3P35030 304 aa9□□□□□ -0.97
LIG3-203ENST00000585370 FOXG1P55316 489 aaPredicted RBP9□□□□□ -0.97
LIG3-203ENST00000585370 DGCR2P98153 550 aa9□□□□□ -0.97
LIG3-203ENST00000585370 FAM3AP98173 230 aa9□□□□□ -0.97
LIG3-203ENST00000585370 SNTB2Q13425 540 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 GPR176Q14439 515 aa9□□□□□ -0.97
LIG3-203ENST00000585370 ARL6IP1Q15041 203 aa9□□□□□ -0.97
LIG3-203ENST00000585370 KISS1Q15726 138 aa9□□□□□ -0.97
LIG3-203ENST00000585370 SFRP5Q5T4F7 317 aa9□□□□□ -0.97
LIG3-203ENST00000585370 C1orf185Q5T7R7 199 aa9□□□□□ -0.97
LIG3-203ENST00000585370 TMEM42Q69YG0 159 aa9□□□□□ -0.97
LIG3-203ENST00000585370 AWAT2Q6E213 333 aa9□□□□□ -0.97
LIG3-203ENST00000585370 GFRALQ6UXV0 394 aa9□□□□□ -0.97
LIG3-203ENST00000585370 UNQ6126/PRO20091Q6UXV3 157 aa9□□□□□ -0.97
LIG3-203ENST00000585370 C1orf174Q8IYL3 243 aa9□□□□□ -0.97
LIG3-203ENST00000585370 FTMTQ8N4E7 242 aa9□□□□□ -0.97
LIG3-203ENST00000585370 CNEP1R1Q8N9A8 125 aa9□□□□□ -0.97
LIG3-203ENST00000585370 CSNK2A3Q8NEV1 391 aa9□□□□□ -0.97
LIG3-203ENST00000585370 OR4D6Q8NGJ1 314 aa9□□□□□ -0.97
LIG3-203ENST00000585370 FAM57AQ8TBR7 257 aa9□□□□□ -0.97
LIG3-203ENST00000585370 CHAC2Q8WUX2 184 aa9□□□□□ -0.97
LIG3-203ENST00000585370 ITLN2Q8WWU7 325 aaPredicted RBP9□□□□□ -0.97
LIG3-203ENST00000585370 POM121Q96HA1 1249 aa9□□□□□ -0.97
LIG3-203ENST00000585370 GPER1Q99527 375 aa9□□□□□ -0.97
LIG3-203ENST00000585370 S100A13Q99584 98 aa9□□□□□ -0.97
LIG3-203ENST00000585370 SOX7Q9BT81 388 aa9□□□□□ -0.97
LIG3-203ENST00000585370 URM1Q9BTM9 101 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 REPIN1Q9BWE0 567 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 CST11Q9H112 138 aa9□□□□□ -0.97
LIG3-203ENST00000585370 TUBG2Q9NRH3 451 aa9□□□□□ -0.97
LIG3-203ENST00000585370 NPAP1Q9NZP6 1156 aa9□□□□□ -0.97
LIG3-203ENST00000585370 EIF3KQ9UBQ5 218 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 ZNF107Q9UII5 783 aaPredicted RBP9□□□□□ -0.97
LIG3-203ENST00000585370 SLC7A11Q9UPY5 501 aa9□□□□□ -0.97
LIG3-203ENST00000585370 MRPS28Q9Y2Q9 187 aaKnown RBP9□□□□□ -0.97
LIG3-203ENST00000585370 CCDC168Q8NDH2 2452 aa9□□□□□ -0.97
LIG3-203ENST00000585370 TRAV18A0A075B6X5 111 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 IGKV1-9A0A0C4DH69 117 aa8.99□□□□□ -0.97
LIG3-203ENST00000585370 LINC00854A0A1B0GVQ3 168 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms