RNA–Protein interactions for RNA: ENST00000584908.5

ERBB2-222, Transcript of erb-b2 receptor tyrosine kinase 2, human

TSL 1 (best)

Gene ERBB2, Length 1,316 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ERBB2-222	ENST00000584908	GRP	P07492	148 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	WNT2	P09544	360 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	HNF1A	P20823	631 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	ADARB1	P78563	741 aa	Known RBP	13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	RIPPLY1	Q0D2K3	151 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	RAB40B	Q12829	278 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	FAM201A	Q5SY85	155 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZNF691	Q5VV52	312 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	TTC23	Q5W5X9	447 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	TMEM42	Q69YG0	159 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	FDX2	Q6P4F2	183 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	PRIMA1	Q86XR5	153 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZDHHC23	Q8IYP9	409 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	GCSAM	Q8N6F7	178 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	FAM71F1	Q96KD3	344 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	MICU1	Q9BPX6	476 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	RTL8A	Q9BWD3	113 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	FGF23	Q9GZV9	251 aa	Predicted RBP	13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	LPAR2	Q9HBW0	351 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	C1orf123	Q9NWV4	160 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	MIOX	Q9UGB7	285 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	LRCH1	Q9Y2L9	728 aa		13.61	□□□□□ -0.23
ERBB2-222	ENST00000584908	CUBN	O60494	3623 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	DAPL1	A0PJW8	107 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	TNFRSF13B	O14836	293 aa	Predicted RBP	13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	FOXH1	O75593	365 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	RPP14	O95059	124 aa	Known RBP	13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZNF205	O95201	554 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	GATA3	P23771	443 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZFP36	P26651	326 aa	Known RBP	13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	THBS2	P35442	1172 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	CEACAM21	Q3KPI0	293 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	WDR82	Q6UXN9	313 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	DCDC5	Q6ZRR9	648 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZNF826P	Q6ZT77	177 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	DOK3	Q7L591	496 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	FAM220A	Q7Z4H9	259 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	CCDC54	Q8NEL0	328 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	OR14K1	Q8NGZ2	314 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	PIGC	Q92535	297 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ZNF649	Q9BS31	505 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	TRIM36	Q9NQ86	728 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	INPP5E	Q9NRR6	644 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ACOXL	Q9NUZ1	547 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	ENPP5	Q9UJA9	477 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	GTF2A1L	Q9UNN4	478 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	SLC22A13	Q9Y226	551 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	PIGL	Q9Y2B2	252 aa		13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908	RPL36	Q9Y3U8	105 aa	Known RBP	13.6	□□□□□ -0.23
ERBB2-222	ENST00000584908		A6NLC8	198 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	LGALS8	O00214	317 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	FADS2	O95864	444 aa	Known RBP	13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	FAH	P16930	419 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	PSMB10	P40306	273 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	SEC61A1	P61619	476 aa	Known RBP	13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	ACTA2	P62736	377 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	ACTG2	P63267	376 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	IL18R1	Q13478	541 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	GALE	Q14376	348 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	TP53I3	Q53FA7	332 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	TEX36	Q5VZQ5	186 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	THAP5	Q7Z6K1	395 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	COMMD2	Q86X83	199 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	SYS1	Q8N2H4	156 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	PRSS35	Q8N3Z0	413 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	DHRSX	Q8N5I4	330 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	OR5A2	Q8NGI9	324 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	MYCBP	Q99417	103 aa	Predicted RBP	13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	JAM3	Q9BX67	310 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	AMBN	Q9NP70	447 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	GNG8	Q9UK08	70 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908	MYRF	Q9Y2G1	1151 aa		13.59	□□□□□ -0.23
ERBB2-222	ENST00000584908		A0A0G2JMP0	313 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908		A0A0X1KG70	313 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	OOEP	A6NGQ2	149 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908		H0YAE9	185 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908		J3QLI3	93 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	P2RY10	O00398	339 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	NDUFA2	O43678	99 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	KIR3DL2	P43630	455 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	OR12D2	P58182	307 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	CSNK2B	P67870	215 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	LCN2	P80188	198 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	KCNJ8	Q15842	424 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	KLHL22	Q53GT1	634 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	ESCO2	Q56NI9	601 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	WDR38	Q5JTN6	314 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	SETD9	Q8NE22	299 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	OR4M2	Q8NGB6	313 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	OR10Z1	Q8NGY1	313 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	OR2G2	Q8NGZ5	317 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	CYGB	Q8WWM9	190 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	NEIL1	Q96FI4	390 aa	Predicted RBP	13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	MRPL48	Q96GC5	212 aa	Known RBP	13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	RNF170	Q96K19	258 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	HIST1H2AA	Q96QV6	131 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	NKX1-2	Q9UD57	310 aa	Predicted RBP	13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	HSPE1-MOB4	S4R3N1	261 aa		13.58	□□□□□ -0.24
ERBB2-222	ENST00000584908	FBN1	P35555	2871 aa	Known RBP	13.57	□□□□□ -0.24

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