RNA–Protein interactions for RNA: ENST00000583976.1

SKA2-209, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 2

Gene SKA2, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-209ENST00000583976 KITLGP21583 273 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 PRTN3P24158 256 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 PSMA6P60900 246 aaKnown RBP13.1□□□□□ -0.31
SKA2-209ENST00000583976 ACTC1P68032 377 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 ACTA1P68133 377 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 RAB40BQ12829 278 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 TIGD6Q17RP2 521 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 TMEM155Q4W5P6 130 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 TP53I3Q53FA7 332 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 LAIR2Q6ISS4 152 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 RBMS3Q6XE24 437 aaKnown RBP13.1□□□□□ -0.31
SKA2-209ENST00000583976 LHFPL3Q86UP9 236 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 KLHL36Q8N4N3 616 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 ACBD7Q8N6N7 88 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 BPIFB6Q8NFQ5 453 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 ZNF420Q8TAQ5 688 aaPredicted RBP13.1□□□□□ -0.31
SKA2-209ENST00000583976 PPP1R14AQ96A00 147 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 SGK3Q96BR1 496 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 SP140LQ9H930 580 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 GNG8Q9UK08 70 aa13.1□□□□□ -0.31
SKA2-209ENST00000583976 TRAV40A0A0B4J280 105 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 XRCC2O43543 280 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 XPNPEP2O43895 674 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 SELEP16581 610 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 TNFSF4P23510 183 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 HSPA13P48723 471 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 MFGE8Q08431 387 aaPredicted RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 FOXL1Q12952 345 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 BAMBIQ13145 260 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 ZNF829Q3KNS6 432 aaPredicted RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 ZNF684Q5T5D7 378 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 SHISA2Q6UWI4 295 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 LRRC28Q86X40 367 aaPredicted RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 OR52H1Q8NGJ2 320 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 REEP6Q96HR9 211 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 MRI1Q9BV20 369 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 OR10A2Q9H208 303 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 UNKLQ9H9P5 680 aaKnown RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 MRPS18AQ9NVS2 196 aaKnown RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 FAM206AQ9NX38 181 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 OR5V1Q9UGF6 321 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 PPP1R3CQ9UQK1 317 aa13.09□□□□□ -0.31
SKA2-209ENST00000583976 POLR3KQ9Y2Y1 108 aaPredicted RBP13.09□□□□□ -0.31
SKA2-209ENST00000583976 GGT3PA6NGU5 568 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 TMEM178BH3BS89 294 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 J3QLW9 94 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 FAM20BO75063 409 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 CYB5R3P00387 301 aaPredicted RBP13.08□□□□□ -0.32
SKA2-209ENST00000583976 ZNF19P17023 458 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 TNFRSF1AP19438 455 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 DCTDP32321 178 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 PSMB10P40306 273 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 OR12D2P58182 307 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 HOXA4Q00056 320 aaPredicted RBP13.08□□□□□ -0.32
SKA2-209ENST00000583976 ESCO2Q56NI9 601 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 FAM201AQ5SY85 155 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 FAM220AQ7Z4H9 259 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 OR8B12Q8NGG6 310 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 FBLIM1Q8WUP2 373 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 SPRYD4Q8WW59 207 aaPredicted RBP13.08□□□□□ -0.32
SKA2-209ENST00000583976 GGHQ92820 318 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 CNBD2Q96M20 576 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 ALG8Q9BVK2 526 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 PBOV1Q9GZY1 135 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 GCM1Q9NP62 436 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 ACOXLQ9NUZ1 547 aa13.08□□□□□ -0.32
SKA2-209ENST00000583976 CD300LBA8K4G0 201 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 LOC110117498-PIK3R3F6TDL0 507 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 SRSF10O75494 262 aaKnown RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 SULT1C4O75897 302 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 IGHA1P01876 353 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 RNASE1P07998 156 aaKnown RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 RPS2P15880 293 aaKnown RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 MYF6P23409 242 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 CD80P33681 288 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 MDH2P40926 338 aaKnown RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 PAX2Q02962 417 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 GALEQ14376 348 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 SLC9A3R2Q15599 337 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 SNCBQ16143 134 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 CDONQ4KMG0 1287 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 OR8G5Q8NG78 346 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 MEGF10Q96KG7 1140 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 LYZL4Q96KX0 146 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 C4orf36Q96KX1 117 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 SSBP3Q9BWW4 388 aaPredicted RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 ANKRD60Q9BZ19 345 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 ZNF696Q9H7X3 374 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 FGF20Q9NP95 211 aaPredicted RBP13.07□□□□□ -0.32
SKA2-209ENST00000583976 ERVK13-1Q9NX77 482 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 IL19Q9UHD0 177 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 OR52A1Q9UKL2 312 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 SLC22A13Q9Y226 551 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 R4GMQ9 66 aa13.07□□□□□ -0.32
SKA2-209ENST00000583976 TGP01266 2768 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 IRGMA1A4Y4 181 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 IQCF6A8MYZ5 107 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 H0YL77 283 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 MLNRO43193 412 aa13.06□□□□□ -0.32
SKA2-209ENST00000583976 MDKP21741 143 aaPredicted RBP13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms