RNA–Protein interactions for RNA: ENST00000583344.1

SMCHD1-208, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 2

Gene SMCHD1, Length 738 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-208ENST00000583344 CSNK1G2P78368 415 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF85Q03923 595 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PAX8Q06710 450 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PDZK1IP1Q13113 114 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 GPM6BQ13491 265 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 MPPED2Q15777 294 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 ARHGAP11BQ3KRB8 267 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC25A53Q5H9E4 307 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PIP5KL1Q5T9C9 394 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OLFML2AQ68BL7 652 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM215Q68D42 235 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC48A1Q6P1K1 146 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 NIPAL3Q6P499 406 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 RPL22L1Q6P5R6 122 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 C3P1Q6ZMU1 363 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 C16orf62Q7Z3J2 963 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 HSD17B13Q7Z5P4 300 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 COMMD7Q86VX2 200 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC39A11Q8N1S5 342 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 STPG2Q8N412 459 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 DEFB123Q8N688 67 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SAMD12Q8N8I0 201 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 ZFP41Q8N8Y5 198 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 THAP8Q8NA92 274 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 VN1R2Q8NFZ6 395 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR11G2Q8NGC1 345 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR52M1Q8NGK5 317 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5D16Q8NGK9 328 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR2T27Q8NH04 317 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR4A16Q8NH70 328 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR5K2Q8NHB8 316 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 TRMT10AQ8TBZ6 339 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 RPS4Y2Q8TD47 263 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SMIM4Q8WVI0 70 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 TFGQ92734 400 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 HIST1H2ACQ93077 130 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 EXOSC8Q96B26 276 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 CNRIP1Q96F85 164 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC41A3Q96GZ6 507 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PGLYRP3Q96LB9 341 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 C12orf66Q96MD2 445 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF681Q96N22 645 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 OR7D2Q96RA2 312 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 RASL10BQ96S79 203 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 MCHR1Q99705 422 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 AICDAQ9GZX7 198 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 ALX4Q9H161 411 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 LRRN3Q9H3W5 708 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 RERGLQ9H628 205 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 HRASLSQ9HDD0 168 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 Q9N2K0 584 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 C12orf4Q9NQ89 552 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 GSN-AS1Q9NRJ2 163 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 GPR173Q9NS66 373 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 NUDT15Q9NV35 164 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 C14orf105Q9NVL8 296 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 TEX10Q9NXF1 929 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PIPOXQ9P0Z9 390 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 B3GAT1Q9P2W7 334 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 CA5BQ9Y2D0 317 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC35A3Q9Y2D2 325 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 TMED3Q9Y3Q3 217 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 KCNE3Q9Y6H6 103 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 HELZP42694 1942 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 MTCL1Q9Y4B5 1905 aaKnown RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 KIF26AQ9ULI4 1882 aaPredicted RBP3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 PCM1Q15154 2024 aa3.26□□□□□ -1.89
SMCHD1-208ENST00000583344 DENND4CQ5VZ89 1909 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OBSL1O75147 1896 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 FAM230AA0A1W2PPH8 454 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 A0A1W2PPK0 400 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TRAPPC13A5PLN9 417 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MPTX1A8MV57 137 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SRRM5B3KS81 715 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 TMEM150CB9EJG8 249 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 F8VVB4 439 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 F8VWA3 439 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 M0R233 179 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ZNF593O00488 134 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ABCD4O14678 606 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 PDCD5O14737 125 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 OR1F1O43749 312 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 AQP8O94778 261 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SLC2A10O95528 541 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ATP1B1P05026 303 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 DBIP07108 87 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 MELTFP08582 738 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ACSM4P0C7M7 580 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SMIM10L1P0DMW3 83 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CD37P11049 281 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 F3P13726 295 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 GABRA1P14867 456 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ATF1P18846 271 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 SRMP19623 302 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 CXCL2P19875 107 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 DRD5P21918 477 aa3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 RPS4Y1P22090 263 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 HIST1H1TP22492 207 aaPredicted RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 ATP5A1P25705 553 aaKnown RBP3.25□□□□□ -1.89
SMCHD1-208ENST00000583344 DPP4P27487 766 aa3.25□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms