RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 GPR137Q96N19 417 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 NEDD4LQ96PU5 975 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CACNG6Q9BXT2 260 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 ACTR6Q9GZN1 396 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CHST5Q9GZS9 411 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 OPA3Q9H6K4 179 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 SCPEP1Q9HB40 452 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 GPR173Q9NS66 373 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 NPAP1Q9NZP6 1156 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 ZNF319Q9P2F9 582 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 CLCF1Q9UBD9 225 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 ERRFI1Q9UJM3 462 aaPredicted RBP8.08□□□□□ -1.12
SS18-220ENST00000582092 NUBP2Q9Y5Y2 271 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 PCNX1Q96RV3 2341 aa8.08□□□□□ -1.12
SS18-220ENST00000582092 LRRK2Q5S007 2527 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 TENM4Q6N022 2769 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 ZNF816-ZNF321PA0A0X1KG74 233 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 FAM230AA0A1W2PPH8 454 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 MEIOCA2RUB1 952 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 INMT-MINDY4F8WBC2 141 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 PRRG2O14669 202 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 MPIG6BO95866 241 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 CYB5AP00167 134 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 MMP7P09237 267 aaPredicted RBP8.07□□□□□ -1.12
SS18-220ENST00000582092 GTF2F2P13984 249 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 KIR2DL3P43628 341 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 RFX2P48378 723 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 PTH2RP49190 550 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 VEGFCP49767 419 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 GSK3AP49840 483 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 MRPS15P82914 257 aaKnown RBP8.07□□□□□ -1.12
SS18-220ENST00000582092 SRSF1Q07955 248 aaKnown RBP eCLIP8.07□□□□□ -1.12
SS18-220ENST00000582092 ARL6IP1Q15041 203 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 RSU1Q15404 277 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 KISS1Q15726 138 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 CARTPTQ16568 116 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 RSPO1Q2MKA7 263 aaPredicted RBP8.07□□□□□ -1.12
SS18-220ENST00000582092 PCGF3Q3KNV8 242 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 TBRG1Q3YBR2 411 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 SLC22A6Q4U2R8 563 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 ZBTB37Q5TC79 503 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 PLCXD3Q63HM9 321 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 NSUN5P2Q63ZY6 315 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 FAM166AQ6J272 317 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 LHFPL2Q6ZUX7 228 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 FJX1Q86VR8 437 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 CADM3Q8N126 398 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 ACBD4Q8NC06 268 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 CSNK2A3Q8NEV1 391 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 STEAP2Q8NFT2 490 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 OR56B1Q8NGI3 324 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 OR4D6Q8NGJ1 314 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 OR51T1Q8NGJ9 327 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 FGFBP3Q8TAT2 258 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 DEDD2Q8WXF8 326 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 BCL2L2Q92843 193 aaPredicted RBP8.07□□□□□ -1.12
SS18-220ENST00000582092 PIGTQ969N2 578 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 CREB3L1Q96BA8 519 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 SPSB1Q96BD6 273 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 PSMG3-AS1Q96PY0 264 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 SPACA5Q96QH8 159 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 C1QTNF5Q9BXJ0 243 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 TMEM59Q9BXS4 323 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 METTL9Q9H1A3 318 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 IFT46Q9NQC8 304 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 ETAA1Q9NY74 926 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 MRPL15Q9P015 296 aaKnown RBP8.07□□□□□ -1.12
SS18-220ENST00000582092 ZNF407Q9C0G0 2248 aa8.07□□□□□ -1.12
SS18-220ENST00000582092 ANKRD30BLA7E2S9 258 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CCL21O00585 134 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 LANCL1O43813 399 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 RAD51DO75771 328 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CCNKO75909 580 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 IGLV3-1P01715 115 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 MT-ND4P03905 459 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CRHP06850 196 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 LPLP06858 475 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 AKAIN1P0CW23 69 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 TMIGD3P0DMS9 266 aaPredicted RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 CD37P11049 281 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 PRF1P14222 555 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 GIFP27352 417 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 PTGFRP43088 359 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CA7P43166 264 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 RBP2P50120 134 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 FUT6P51993 359 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 EFNB2P52799 333 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 RAB25P57735 213 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 GNG2P59768 71 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 BTG1P62324 171 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 CDNFQ49AH0 187 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 ACSF3Q4G176 576 aaPredicted RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 HIKESHIQ53FT3 197 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 C1orf185Q5T7R7 199 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 AGAP6Q5VW22 663 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 OR10K2Q6IF99 312 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 ZNF529Q6P280 563 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 ZNF782Q6ZMW2 699 aaPredicted RBP8.06□□□□□ -1.12
SS18-220ENST00000582092 Q6ZT83 130 aa8.06□□□□□ -1.12
SS18-220ENST00000582092 BEND4Q6ZU67 534 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms