RNA–Protein interactions for RNA: ENST00000581383.1

SMCHD1-205, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 806 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-205ENST00000581383 TMEM236Q5W0B7 351 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 KDM4DQ6B0I6 523 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 NDUFAF7Q7L592 441 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 LINC00523Q86TU6 105 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 ERO1BQ86YB8 467 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 ZNF101Q8IZC7 436 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 TMEM104Q8NE00 496 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 FBXO36Q8NEA4 188 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 OR1L1Q8NH94 360 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 BAALCQ8WXS3 180 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 TMEM159Q96B96 161 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 RDH12Q96NR8 316 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 CHCHD7Q9BUK0 85 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 EMC6Q9BV81 110 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 OSBPL11Q9BXB4 747 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 FBXO44Q9H4M3 255 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 LRRC42Q9Y546 428 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 OR51B2Q9Y5P1 312 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 SCRIBQ14160 1630 aa2.57□□□□□ -2
SMCHD1-205ENST00000581383 IGHV1-3A0A0C4DH29 117 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 CENPXA8MT69 81 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 LINC01619G3V211 115 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 LGALS9O00182 355 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 LCA5LO95447 670 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 IGLV2-8P01709 118 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 MBP02144 154 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 PRKACAP17612 351 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 RPL18AQ02543 176 aaKnown RBP2.56□□□□□ -2
SMCHD1-205ENST00000581383 KRTAP13-2Q52LG2 175 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 FAM222AQ5U5X8 452 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 MFSD14CQ5VZR4 134 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 OR2W3Q7Z3T1 314 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 OR8D1Q8WZ84 308 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 FAM19A4Q96LR4 140 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 GABRG3Q99928 467 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 MARVELD1Q9BSK0 173 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 SFXN3Q9BWM7 321 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 ARMC7Q9H6L4 198 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 TMEM100Q9NV29 134 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 NDRG2Q9UN36 371 aaKnown RBP2.56□□□□□ -2
SMCHD1-205ENST00000581383 SIGLEC7Q9Y286 467 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 KPTNQ9Y664 436 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 NACADO15069 1562 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 BICRAQ9NZM4 1560 aa2.56□□□□□ -2
SMCHD1-205ENST00000581383 A0A1W2PRF3 423 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 A0A1W2PRM7 423 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 PSPHP1O15172 72 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 CD5P06127 495 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 CELP19835 753 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 PRKACBP22694 351 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 PSMB5P28074 263 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ARL2P36404 184 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 TAS2R39P59534 338 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 LUZP6Q538Z0 58 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ZCCHC6Q5VYS8 1495 aaKnown RBP2.55□□□□□ -2
SMCHD1-205ENST00000581383 STEAP4Q687X5 459 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 SLC35D2Q76EJ3 337 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 DAW1Q8N136 415 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ST20-AS1Q8NBB2 130 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ENKURQ8TC29 256 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 TFGQ92734 400 aaPredicted RBP2.55□□□□□ -2
SMCHD1-205ENST00000581383 GPR82Q96P67 336 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 TMEM175Q9BSA9 504 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ZSCAN16Q9H4T2 348 aaPredicted RBP2.55□□□□□ -2
SMCHD1-205ENST00000581383 HEBP1Q9NRV9 189 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 IFNKQ9P0W0 207 aa2.55□□□□□ -2
SMCHD1-205ENST00000581383 ZNF608Q9ULD9 1512 aaPredicted RBP2.54□□□□□ -2
SMCHD1-205ENST00000581383 KIF27Q86VH2 1401 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 COL1A2P08123 1366 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 A0A1W2PPV4 95 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 ZNF701M0R085 212 aaPredicted RBP2.54□□□□□ -2
SMCHD1-205ENST00000581383 DFFAO00273 331 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 TTC4O95801 387 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 CXCR1P25024 350 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 INCA1Q0VD86 236 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 FUT5Q11128 374 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 KLHL12Q53G59 568 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 MIR7-3HGQ8N6C7 128 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 SPANXA2-OT1Q8N9U9 137 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 OR4M2Q8NGB6 313 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 OR51L1Q8NGJ5 315 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 TOP1MTQ969P6 601 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 ALS2CR12Q96Q35 445 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 NAPGQ99747 312 aaPredicted RBP2.54□□□□□ -2
SMCHD1-205ENST00000581383 ARV1Q9H2C2 271 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 TAS2R5Q9NYW4 299 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 WIF1Q9Y5W5 379 aa2.54□□□□□ -2
SMCHD1-205ENST00000581383 SBNO1A3KN83 1393 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 IGKV1D-17A0A075B6S4 117 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 CCL15-CCL14A0A0B4J2E2 113 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 MYL12BO14950 172 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 CCDC22O60826 627 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 UPK1BO75841 260 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 SCO1O75880 301 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 GCGP01275 180 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 IGKV1-17P01599 117 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 IGLV3-19P01714 112 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 CSKP41240 450 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 TAS2R43P59537 309 aa2.53□□□□□ -2
SMCHD1-205ENST00000581383 SLC35A1P78382 337 aa2.53□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms