RNA–Protein interactions for RNA: ENST00000581226.1

SMCHD1-204, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 459 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-204ENST00000581226 TAS2R43P59537 309 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 WDR82Q6UXN9 313 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 ASCL4Q6XD76 172 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 Q6ZSR6 202 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 MRPL21Q7Z2W9 205 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 VKORC1L1Q8N0U8 176 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 CDS1Q92903 461 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 JSRP1Q96MG2 331 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 AGMATQ9BSE5 352 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 FBXO44Q9H4M3 255 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 LINC00574Q9H8X3 128 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 CD209Q9NNX6 404 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 MRPL22Q9NWU5 206 aaKnown RBP2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 TAS2R5Q9NYW4 299 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF230Q9UIE0 474 aaPredicted RBP2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 ZNF257Q9Y2Q1 563 aa2.09□□□□□ -2.07
SMCHD1-204ENST00000581226 COL5A1P20908 1838 aaPredicted RBP2.09□□□□□ -2.08
SMCHD1-204ENST00000581226 MROH7Q68CQ1 1323 aa2.09□□□□□ -2.08
SMCHD1-204ENST00000581226 LOXHD1Q8IVV2 1947 aa2.09□□□□□ -2.08
SMCHD1-204ENST00000581226 KIF27Q86VH2 1401 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 A0A1W2PNN7 141 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 A0A1W2PRD5 423 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 SLC22A20A6NK97 555 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ANKRD65E5RJM6 399 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 M0R1X1 148 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 OR7C2O60412 319 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 SLC16A7O60669 478 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 KRT16P08779 473 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 CPN2P22792 545 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 CCT6AP40227 531 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ZNF235Q14590 738 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ZNF664Q8N3J9 261 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 DRAM1Q8N682 238 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ZNF321PQ8N8H1 164 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 PROKR2Q8NFJ6 384 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ENKURQ8TC29 256 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 CA5BP1Q8WTZ4 195 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 DCAKDQ8WVC6 231 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 RAB1CQ92928 201 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 KIAA1143Q96AT1 154 aaPredicted RBP2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 APH1AQ96BI3 265 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 FAM19A4Q96LR4 140 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 C9orf72Q96LT7 481 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 GPR21Q99679 349 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 SEC22CQ9BRL7 303 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ANP32EQ9BTT0 268 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 DEFB129Q9H1M3 183 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 IL37Q9NZH6 218 aa2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 ZMAT5Q9UDW3 170 aaKnown RBP2.08□□□□□ -2.08
SMCHD1-204ENST00000581226 CENPBD1B2RD01 187 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 PFN1P07737 140 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 RAB5AP20339 215 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 APLNRP35414 380 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 PEX19P40855 299 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 ELF3P78545 371 aaPredicted RBP2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 ZNF33AQ06730 810 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 BTN1A1Q13410 526 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 TSC22D1Q15714 1073 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 TBPL2Q6SJ96 375 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 KIF2BQ8N4N8 673 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 CERS2Q96G23 380 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 UBE2E2Q96LR5 201 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 CSPG4P5Q96PW8 444 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 CHRNA10Q9GZZ6 450 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 IQCGQ9H095 443 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 DYRK4Q9NR20 520 aa2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 CHTOPQ9Y3Y2 248 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 DHX57Q6P158 1386 aaKnown RBP2.07□□□□□ -2.08
SMCHD1-204ENST00000581226 LTBP4Q8N2S1 1624 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 SIGLEC1Q9BZZ2 1709 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 ARPC4-TTLL3A0A0A6YYG9 625 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 SLC19A2O60779 497 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 IGLV2-8P01709 118 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 IGLV6-57P01721 117 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 CATP04040 527 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 IGLV7-43P04211 117 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 CRYGCP07315 174 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 GPR1P46091 355 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 LCN2P80188 198 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 TFDP2Q14188 446 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 HADHQ16836 314 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 C5orf64Q2M2E5 130 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 MFSD14CQ5VZR4 134 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 KDM4DQ6B0I6 523 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 TTC19Q6DKK2 380 aaPredicted RBP2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 TRAM1L1Q8N609 369 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 ITFG1Q8TB96 612 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 TEAD3Q99594 435 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 EMC6Q9BV81 110 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 BLZF1Q9H2G9 400 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 RGCCQ9H4X1 137 aa2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 TDRD3Q9H7E2 651 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 RBFOX1Q9NWB1 397 aaKnown RBP2.06□□□□□ -2.08
SMCHD1-204ENST00000581226 A0A0A6YYD5 115 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 A0A0B4J2E0 115 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 A8MWL6 223 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 TRDMT1O14717 391 aaKnown RBP2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 CTNSO60931 367 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 TRBV12-3P01733 135 aa2.05□□□□□ -2.08
SMCHD1-204ENST00000581226 KLK1P06870 262 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms