RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 TOX4O94842 621 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF205O95201 554 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 ACSM4P0C7M7 580 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 ALOX5APP20292 161 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 HTR1FP30939 366 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 BLVRAP53004 296 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 AQP4P55087 323 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 TPTEP56180 551 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 EIF2B1Q14232 305 aaKnown RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 LAIR2Q6ISS4 152 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 COLCA1Q6ZS62 124 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 SLC16A9Q7RTY1 509 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 SPERTQ8NA61 448 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 OTOSQ8NHW6 89 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 TRUB1Q8WWH5 349 aaKnown RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 CYGBQ8WWM9 190 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 DYRK2Q92630 601 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 SLAMF6Q96DU3 332 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 PCGF1Q9BSM1 259 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 ADAT1Q9BUB4 502 aaKnown RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 PRRG3Q9BZD7 231 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 RNF7Q9UBF6 113 aa11.12□□□□□ -0.63
TRAF4-214ENST00000580073 CAB39Q9Y376 341 aaPredicted RBP11.12□□□□□ -0.63
TRAF4-214ENST00000580073 TET2Q6N021 2002 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 MDFIC2A0A1B0GVS7 189 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 BTBD17A6NE02 478 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 H0YL77 283 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 LGALS8O00214 317 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 TNFRSF13BO14836 293 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 GMDSO60547 372 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 FAM20BO75063 409 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 ECDO95905 644 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 LCATP04180 440 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 OMGP23515 440 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 OTX1P32242 354 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 CFHR2P36980 270 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 PSMB10P40306 273 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 HNRNPA0Q13151 305 aaKnown RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 GK2Q14410 553 aaPredicted RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 SMN1Q16637 294 aaKnown RBP11.11□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF691Q5VV52 312 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 SSX6Q7RTT6 188 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 DHRSXQ8N5I4 330 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 SCCPDHQ8NBX0 429 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 RNF133Q8WVZ7 376 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 ADI1Q9BV57 179 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 TTTY10Q9BZA0 68 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 C8orf4Q9NR00 106 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 CENPMQ9NSP4 180 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 ACOXLQ9NUZ1 547 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 IMPAD1Q9NX62 359 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 HAO2Q9NYQ3 351 aa11.11□□□□□ -0.63
TRAF4-214ENST00000580073 TRRAPQ9Y4A5 3859 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 F5H5K5 113 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 J3QRE1 110 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 M0R135 149 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 PSMD9O00233 223 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 ADAM20O43506 726 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 HLA-DPB1P04440 258 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 MELTFP08582 738 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 CAPGP40121 348 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 OPRL1P41146 370 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 ISL1P61371 349 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 OR8B8Q15620 311 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 GDPGP1Q6ZNW5 385 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 GID4Q8IVV7 300 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 KIR3DL3Q8N743 410 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 OR51G2Q8NGK0 314 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 CNIH3Q8TBE1 160 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 THEM6Q8WUY1 208 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 TFAP2CQ92754 450 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF799Q96GE5 643 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 CITED1Q99966 193 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 YIPF3Q9GZM5 350 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 DPAGT1Q9H3H5 408 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 AMBNQ9NP70 447 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 C14orf119Q9NWQ9 140 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 C1RLQ9NZP8 487 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 MRPL15Q9P015 296 aaKnown RBP11.1□□□□□ -0.63
TRAF4-214ENST00000580073 H2AFY2Q9P0M6 372 aaPredicted RBP11.1□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF319Q9P2F9 582 aa11.1□□□□□ -0.63
TRAF4-214ENST00000580073 WARS2Q9UGM6 360 aaKnown RBP11.1□□□□□ -0.63
TRAF4-214ENST00000580073 IGHV3-64DA0A0J9YX35 117 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 OOEPA6NGQ2 149 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 GGT3PA6NGU5 568 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 SLC22A31A6NKX4 558 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 A6NLC8 198 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 C22orf46C9J442 243 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 SLC2A1P11166 492 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 PRKXP51817 358 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 PRSS12P56730 875 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 MAB21L1Q13394 359 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 SNAI3Q3KNW1 292 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 LCN1P1Q5VSP4 162 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF841Q6ZN19 808 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 PRSS45Q7RTY3 260 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 SLC35F2Q8IXU6 374 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 ZNF555Q8NEP9 628 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 FBLIM1Q8WUP2 373 aa11.09□□□□□ -0.63
TRAF4-214ENST00000580073 LGALS12Q96DT0 336 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms