RNA–Protein interactions for RNA: ENST00000577300.1

SMCHD1-202, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 3

Gene SMCHD1, Length 506 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-202ENST00000577300 LRRC75AQ8NAA5 344 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 NECAP1Q8NC96 275 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR11H1Q8NG94 326 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR9G4Q8NGQ1 327 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR9Q1Q8NGQ5 310 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR9A4Q8NGU2 314 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR10X1Q8NGY0 326 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR11H2Q8NH07 326 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 OR51A7Q8NH64 312 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ZFAND1Q8TCF1 268 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 GNPDA2Q8TDQ7 276 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 GPR151Q8TDV0 419 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 DCAKDQ8WVC6 231 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 NEIL2Q969S2 332 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 MCHR2Q969V1 340 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 TBRG4Q969Z0 631 aaKnown RBP eCLIP2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 PTH2Q96A98 100 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 SMIM12Q96EX1 92 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 WDR34Q96EX3 536 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 CMTM7Q96FZ5 175 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 COQ2Q96H96 371 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 CNBD2Q96M20 576 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF382Q96SR6 550 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 NAPGQ99747 312 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ECSITQ9BQ95 431 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 RSG1Q9BU20 258 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 PDCD10Q9BUL8 212 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 APOOQ9BUR5 198 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 MAP1LC3CQ9BXW4 147 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 BEX2Q9BXY8 128 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 CHRNA10Q9GZZ6 450 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ING2Q9H160 280 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 TPT1P8Q9HAU6 139 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 PLEKHA1Q9HB21 404 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 POPDC2Q9HBU9 364 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 AGPAT4Q9NRZ5 378 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 C14orf105Q9NVL8 296 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 USE1Q9NZ43 259 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 TMEM216Q9P0N5 145 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 COPZ2Q9P299 210 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF223Q9UK11 482 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF490Q9ULM2 529 aaPredicted RBP2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 PIGLQ9Y2B2 252 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 PEX16Q9Y5Y5 336 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 SAR1BQ9Y6B6 198 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 WNK3Q9BYP7 1800 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 TCOF1Q13428 1488 aaKnown RBP2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 USP6P35125 1406 aa2.51□□□□□ -2.01
SMCHD1-202ENST00000577300 SMARCA4P51532 1647 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 KIF26AQ9ULI4 1882 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 IGLV4-60A0A075B6I1 120 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 CIB4A0PJX0 185 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SAGE2PA6NJ88 616 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 J3QRK9 145 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 BHLHE40O14503 412 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SDHDO14521 159 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 RFXANKO14593 260 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 CHEK1O14757 476 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 NBR2O15453 112 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 CYB5BO43169 146 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 XRCC2O43543 280 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 TBL1XO60907 577 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 ICOSLGO75144 302 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SC5DO75845 299 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SUPT7LO94864 414 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 OR4F21O95013 312 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 RCBTB2O95199 551 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 GADD45GO95257 159 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 GPR75O95800 540 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 C6orf47O95873 294 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 PTTG1O95997 202 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 C1QCP02747 245 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 MMP1P03956 469 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SERPIND1P05546 499 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 OR8U9P0C7N5 309 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 CD37P11049 281 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 UQCRBP14927 111 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 AKR1C4P17516 323 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 TSPAN8P19075 237 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 STOMP27105 288 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 GNRHRP30968 328 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SSTR5P35346 364 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 CHI3L1P36222 383 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 PTGFRP43088 359 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 NPBWR2P48146 333 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 RFX3P48380 749 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 TDGF1P3P51864 188 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 TAS2R39P59534 338 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 DYNLL1P63167 89 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 LCN2P80188 198 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 RPL19P84098 196 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 IFITM3Q01628 133 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 ACVR1Q04771 509 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 FGL1Q08830 312 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 ZNF616Q08AN1 781 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 SLC10A7Q0GE19 358 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 PPP1R8Q12972 351 aaKnown RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 MED21Q13503 144 aa2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 GK2Q14410 553 aaPredicted RBP2.5□□□□□ -2.01
SMCHD1-202ENST00000577300 PRPSAP1Q14558 356 aa2.5□□□□□ -2.01
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms