RNA–Protein interactions for RNA: ENST00000574755.5

VPS33B-208, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2

Gene VPS33B, Length 2,356 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-208ENST00000574755 OR51T1Q8NGJ9 327 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PRRT1Q99946 306 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 ELL3Q9HB65 397 aaPredicted RBP12.26□□□□□ -0.45
VPS33B-208ENST00000574755 GPR173Q9NS66 373 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 PLEKHA6Q9Y2H5 1048 aa12.26□□□□□ -0.45
VPS33B-208ENST00000574755 FREM1Q5H8C1 2179 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 LOC100509620A0A075B734 347 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 DHRS7CA6NNS2 312 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 G3V3Q6 166 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 SSX5O60225 188 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 GIPP09681 153 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF24P17028 368 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 CD82P27701 267 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 HRH1P35367 487 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ALDH3B1P43353 468 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ARG2P78540 354 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 RIPPLY1Q0D2K3 151 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 C3AR1Q16581 482 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 C9orf135Q5VTT2 229 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-208ENST00000574755 OR10K1Q8NGX5 313 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 LINC00470Q9BZP3 86 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ALX4Q9H161 411 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ASPMQ8IZT6 3477 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 EP300Q09472 2414 aaPredicted RBP12.25□□□□□ -0.45
VPS33B-208ENST00000574755 OR4E1P0C645 316 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 NAT2P11245 290 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 MGMTP16455 207 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 TMEM50BP56557 158 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 RPS27AP62979 156 aaKnown RBP12.25□□□□□ -0.45
VPS33B-208ENST00000574755 KRTAP27-1Q3LI81 207 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 OR13C8Q8NGS7 320 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 LILRB4Q8NHJ6 448 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ARHGAP5-AS1Q96IT6 56 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 GPR137Q96N19 417 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 SLC2A8Q9NY64 477 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 PIPOXQ9P0Z9 390 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 SLC23A1Q9UHI7 598 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF318Q5VUA4 2279 aa12.25□□□□□ -0.45
VPS33B-208ENST00000574755 OR14I1A6ND48 311 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 MMP7P09237 267 aaPredicted RBP12.24□□□□□ -0.45
VPS33B-208ENST00000574755 MTCP1P56278 107 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 RAP2BP61225 183 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 SLC10A1Q14973 349 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 PABPC1L2AQ5JQF8 200 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 ATPAF1Q5TC12 328 aaPredicted RBP12.24□□□□□ -0.45
VPS33B-208ENST00000574755 ZFP62Q8NB50 900 aaPredicted RBP12.24□□□□□ -0.45
VPS33B-208ENST00000574755 OR2AK2Q8NG84 335 aa12.24□□□□□ -0.45
VPS33B-208ENST00000574755 A0A096LPE4 126 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 A0A1W2PPZ6 126 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 CDRT15L2A8MXV6 281 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF587BE7ETH6 402 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 GOSR2O14653 212 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 OR2A4O95047 310 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 IFNA6P05013 189 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 S100A1P23297 94 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF81P51508 661 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 RRADP55042 308 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 TSPAN5P62079 268 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ARF1P84077 181 aaKnown RBP12.23□□□□□ -0.45
VPS33B-208ENST00000574755 LGALSLQ3ZCW2 172 aaPredicted RBP12.23□□□□□ -0.45
VPS33B-208ENST00000574755 C11orf88Q6PI97 169 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 VASH2Q86V25 355 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 FAM109AQ8N4B1 249 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 FTMTQ8N4E7 242 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 SNAPC3Q92966 411 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 SPSB1Q96BD6 273 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 OR2A7Q96R45 310 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 LDAHQ9H6V9 325 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF391Q9UJN7 358 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 LIPGQ9Y5X9 500 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 FAM230AA0A1W2PPH8 454 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 SIX6O95475 246 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 H2BFSP57053 126 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ARFRP1Q13795 201 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ZMYND11Q15326 602 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 CNN3Q15417 329 aaKnown RBP12.23□□□□□ -0.45
VPS33B-208ENST00000574755 C2orf68Q2NKX9 166 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF766Q5HY98 468 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 MCEMP1Q8IX19 187 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 FAM89BQ8N5H3 189 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 STEAP2Q8NFT2 490 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 OR4K15Q8NH41 348 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 DEFB127Q9H1M4 99 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 BCO1Q9HAY6 547 aa12.23□□□□□ -0.45
VPS33B-208ENST00000574755 OR6C65A6NJZ3 312 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 MFNGO00587 321 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 RAD51DO75771 328 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 ACTL6AO96019 429 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 PMP2P02689 132 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 TMEM225BP0DP42 221 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 TBPP20226 339 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 BLVRBP30043 206 aaPredicted RBP12.22□□□□□ -0.45
VPS33B-208ENST00000574755 SSTR2P30874 369 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 PNLIPRP3Q17RR3 467 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 C17orf107Q6ZR85 190 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 ZNF767PQ75MW2 155 aa12.22□□□□□ -0.45
VPS33B-208ENST00000574755 CPEB3Q8NE35 698 aaKnown RBP12.22□□□□□ -0.45
VPS33B-208ENST00000574755 OR8H1Q8NGG4 311 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms