RNA–Protein interactions for RNA: ENST00000573989.1

TRAPPC1-206, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 436 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-206ENST00000573989 GZMKP49863 264 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ETV1P50549 477 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 MVKQ03426 396 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 TMEM249Q2WGJ8 235 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 CCDC58Q4VC31 144 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 SPRNQ5BIV9 151 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 CLEC9AQ6UXN8 241 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 KCTD8Q6ZWB6 473 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 AHSA2Q719I0 299 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 KRT74Q7RTS7 529 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 MUC20Q8N307 709 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZNF676Q8N7Q3 588 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 MAPK1IP1LQ8NDC0 245 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 OR14K1Q8NGZ2 314 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 Q8TCH9 128 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 DVL3Q92997 716 aaPredicted RBP10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ITPKCQ96DU7 683 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 RNF170Q96K19 258 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ZNF649Q9BS31 505 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 SOX7Q9BT81 388 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ISG20L2Q9H9L3 353 aaKnown RBP10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 UFSP2Q9NUQ7 469 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 FRRS1LQ9P0K9 344 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 BLOC1S6Q9UL45 172 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 HHLA2Q9UM44 414 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 ERGIC3Q9Y282 383 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 CACNG2Q9Y698 323 aa10.78□□□□□ -0.68
TRAPPC1-206ENST00000573989 A0A096LNT2 108 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 TRBV2A0A0J9YWF9 115 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 IGHV3-64DA0A0J9YX35 117 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 hCG_1807616A0A1W2PRN6 198 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR5B21A6NL26 309 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 PTGES3LE9PB15 166 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 TMEM178BH3BS89 294 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 SLC1A7O00341 560 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 GATBO75879 557 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 MDH2P40926 338 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 KIR3DL2P43630 455 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 BTG1P62324 171 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 CEACAM21Q3KPI0 293 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 AVPI1Q5T686 147 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 PRAMEF6Q5VXH4 476 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 PLCXD3Q63HM9 321 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 CYB5R2Q6BCY4 276 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 RPL22L1Q6P5R6 122 aaKnown RBP10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 Q6ZSR3 168 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 MOB3CQ70IA8 216 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 SPICQ8N5J4 248 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR1M1Q8NGA1 313 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR5A2Q8NGI9 324 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR52N1Q8NH53 320 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR5AK2Q8NH90 309 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF420Q8TAQ5 688 aaPredicted RBP10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR5P3Q8WZ94 311 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 RAB39BQ96DA2 213 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 CNBD2Q96M20 576 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 TECTBQ96PL2 329 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 GAL3ST1Q99999 423 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 NARFLQ9H6Q4 476 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 TRIM36Q9NQ86 728 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 RNF7Q9UBF6 113 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 PCDHB10Q9UN67 800 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 ABCA1O95477 2261 aa10.77□□□□□ -0.69
TRAPPC1-206ENST00000573989 PPIAL4EA0A075B759 164 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 LOC100289279A0A1B0GTE1 492 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 PPIAL4DF5H284 164 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 PPIAL4FP0DN26 164 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF20P17024 532 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 TAS2R43P59537 309 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 NANOS3P60323 173 aaKnown RBP10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 GNG3P63215 75 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 KCNJ8Q15842 424 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 CEP78Q5JTW2 689 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 LAIR2Q6ISS4 152 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 PP6455Q8WZ26 134 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 FKBP14Q9NWM8 211 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 C1orf123Q9NWV4 160 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 BABAM2Q9NXR7 383 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 SLC7A11Q9UPY5 501 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 PPIAL4AQ9Y536 164 aa10.76□□□□□ -0.69
TRAPPC1-206ENST00000573989 LRP5LA4QPB2 252 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 ANKRD61A6NGH8 418 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR4C45A6NMZ5 311 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 H3BSH0 61 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 FSTL3O95633 263 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CYB5R3P00387 301 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 IGHV2-70P01814 119 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CDK1P06493 297 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 OCM2P0CE71 109 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 OCMP0CE72 109 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CPT2P23786 658 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 C21orf33P30042 268 aaPredicted RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 GPM6AP51674 278 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 WNT4P56705 351 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 ZNF154Q13106 437 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 CNN3Q15417 329 aaKnown RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 MPPED2Q15777 294 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 TMEM155Q4W5P6 130 aa10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 RBM48Q5RL73 367 aaKnown RBP10.75□□□□□ -0.69
TRAPPC1-206ENST00000573989 OR2G6Q5TZ20 316 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms