RNA–Protein interactions for RNA: ENST00000572809.1

NUP88-205, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 771 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-205ENST00000572809 RNF7Q9UBF6 113 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 OPN4Q9UHM6 478 aa6.22□□□□□ -1.41
NUP88-205ENST00000572809 ARHGAP32A7KAX9 2087 aa6.21□□□□□ -1.41
NUP88-205ENST00000572809 ANKRD30BLA7E2S9 258 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 A8MXK9 166 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 G3V2T6 193 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 SELENOFO60613 162 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 FAM20BO75063 409 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 PTBP3O95758 552 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 GRPP07492 148 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 CLEC2LP0C7M8 214 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 RPS2P15880 293 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 ZNF12P17014 697 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 CFL1P23528 166 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 GNALP38405 381 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 OPRL1P41146 370 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 HCCSP53701 268 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 ZNF121P58317 390 aaPredicted RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 RPS7P62081 194 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 GNB2P62879 340 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 FAM3AP98173 230 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 MZT1Q08AG7 82 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 ZNF154Q13106 437 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 APOFQ13790 326 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 PTGES3Q15185 160 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 TIGD6Q17RP2 521 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 ZNF404Q494X3 552 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 SFRP4Q6FHJ7 346 aaPredicted RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 FAHD1Q6P587 224 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 LYPD2Q6UXB3 125 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 SLC16A9Q7RTY1 509 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 PRSS45Q7RTY3 260 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 DEFB108BQ8NET1 73 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 OR56B2PQ8NGI1 322 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 OR52H1Q8NGJ2 320 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 OR8S1Q8NH09 359 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 Q8TCH9 128 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 NEIL1Q96FI4 390 aaPredicted RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 REEP6Q96HR9 211 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 TEAD3Q99594 435 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 ADAT1Q9BUB4 502 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 SSBP3Q9BWW4 388 aaPredicted RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 OR10A2Q9H208 303 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 SLC25A19Q9HC21 320 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 PAPOLBQ9NRJ5 636 aaKnown RBP6.21□□□□□ -1.42
NUP88-205ENST00000572809 DNAJC27Q9NZQ0 273 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 KIF17Q9P2E2 1029 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 ZNF319Q9P2F9 582 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 LRCH1Q9Y2L9 728 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 AP4S1Q9Y587 144 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 INSIG2Q9Y5U4 225 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 AUP1Q9Y679 476 aa6.21□□□□□ -1.42
NUP88-205ENST00000572809 KIR2DS1A0A191URI9 304 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 ALOX5APP20292 161 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 SLC2A5P22732 501 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 FASP25445 335 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 CD80P33681 288 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 NAA10P41227 235 aaPredicted RBP6.2□□□□□ -1.42
NUP88-205ENST00000572809 MTNR1BP49286 362 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 ESRRGP62508 458 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 PAX8Q06710 450 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 KCNJ8Q15842 424 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 ATP6AP1Q15904 470 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 C1orf146Q5VVC0 180 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 BTNL3Q6UXE8 466 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 LRRN1Q6UXK5 716 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 DCDC5Q6ZRR9 648 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 ZNF826PQ6ZT77 177 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 USP43Q70EL4 1123 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 KRT77Q7Z794 578 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 PARP8Q8N3A8 854 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 BPIFB2Q8N4F0 458 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 BOLLQ8N9W6 283 aaKnown RBP6.2□□□□□ -1.42
NUP88-205ENST00000572809 C19orf18Q8NEA5 215 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 BBS1Q8NFJ9 593 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 OR8B3Q8NGG8 313 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 ZFAND2BQ8WV99 257 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 RAB40AQ8WXH6 277 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 C22orf15Q8WYQ4 148 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 DVL3Q92997 716 aaPredicted RBP6.2□□□□□ -1.42
NUP88-205ENST00000572809 DUS3LQ96G46 650 aaKnown RBP6.2□□□□□ -1.42
NUP88-205ENST00000572809 PGAM5Q96HS1 289 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 OR8B2Q96RD0 313 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 MRI1Q9BV20 369 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 SUCNR1Q9BXA5 334 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 YIPF3Q9GZM5 350 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 RGCCQ9H4X1 137 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 NIPAL2Q9H841 368 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 C1orf123Q9NWV4 160 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 CLN8Q9UBY8 286 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 OR5V1Q9UGF6 321 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 LAMP5Q9UJQ1 280 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 NUP50Q9UKX7 468 aa6.2□□□□□ -1.42
NUP88-205ENST00000572809 TRAV38-1A0A0B4J264 116 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 hCG_38984A0A1B0GV85 526 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 ACOD1A6NK06 481 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 TRIM77I1YAP6 450 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 LGALS8O00214 317 aa6.19□□□□□ -1.42
NUP88-205ENST00000572809 TNFRSF13BO14836 293 aaPredicted RBP6.19□□□□□ -1.42
NUP88-205ENST00000572809 NDUFA2O43678 99 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 334.3 ms