RNA–Protein interactions for RNA: ENST00000572787.1

TOPBP1-210, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 4

Gene TOPBP1, Length 402 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-210ENST00000572787 OR7C1O76099 320 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 RENP00797 406 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SERPINA7P05543 415 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 NHLRC4P0CG21 123 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 HLA-DOBP13765 273 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 AK4P27144 223 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SHC1P29353 583 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 NUDT1P36639 197 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 OR3A4PP47883 348 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SLURP1P55000 103 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC35A1P78382 337 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 GAGE5Q13069 117 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 GAGE6Q13070 117 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 FASTKQ14296 549 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 NRF1Q16656 503 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ECSCRQ19T08 205 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 TRMT12Q53H54 448 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 LINC00242Q5T6M2 205 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 GPRC6AQ5T6X5 926 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 N4BP2L1Q5TBK1 243 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 C1orf195Q5TG92 126 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 REP15Q6BDI9 236 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ANGPTL5Q86XS5 388 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 RAB43Q86YS6 212 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 SMIM20Q8N5G0 67 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 WDSUB1Q8N9V3 476 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 KBTBD8Q8NFY9 601 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 OR1P1Q8NH06 330 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 RFESDQ8TAC1 157 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF564Q8TBZ8 553 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 OR51E1Q8TCB6 317 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 MAPK15Q8TD08 544 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 FRAT1Q92837 279 aaPredicted RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 PIK3IP1Q96FE7 263 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ARHGDIGQ99819 225 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 QTRT1Q9BXR0 403 aaKnown RBP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 WDR13Q9H1Z4 485 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 PLAC1Q9HBJ0 212 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 RBM22Q9NW64 420 aaKnown RBP eCLIP4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 PPP4R1LQ9P1A2 415 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 OPTCQ9UBM4 332 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 RIMS3Q9UJD0 308 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 VDAC3Q9Y277 283 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 ASB4Q9Y574 426 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 TAF1LQ8IZX4 1826 aa4.13□□□□□ -1.75
TOPBP1-210ENST00000572787 MRC2Q9UBG0 1479 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 NCBP2LA6PVI3 153 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 RFXAPO00287 272 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 UPK1BO75841 260 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 FCGR3AP08637 254 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 MED14OSP0DP75 135 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 LIFP15018 202 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 PROZP22891 400 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 MEOX2P50222 304 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 CCR6P51684 374 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 ERVFC1-1P60608 527 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 PFN3P60673 137 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 RAP1BP61224 184 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 NAA20P61599 178 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF92Q03936 586 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC10A7Q0GE19 358 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 SNRNP35Q16560 246 aaKnown RBP4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF57Q68EA5 555 aaPredicted RBP4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR2T5Q6IEZ7 315 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 GRINAQ7Z429 371 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 GAPTQ8N292 157 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 FTMTQ8N4E7 242 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 SAMD12Q8N8I0 201 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR1L8Q8NGR8 309 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR10R2Q8NGX6 335 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR2T29Q8NH02 315 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR4X1Q8NH49 305 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 OR2T6Q8NHC8 308 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 C16orf52Q8NHV5 167 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 NT5CQ8TCD5 201 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 CD200R1Q8TD46 325 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 TMEM230Q96A57 120 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 PGLYRP3Q96LB9 341 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 MCHR1Q99705 422 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 DCSTAMPQ9H295 470 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 FBXL15Q9H469 300 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 CLMPQ9H6B4 373 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 ENY2Q9NPA8 101 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 KCNJ16Q9NPI9 418 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 DDIT4Q9NX09 232 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 KCNIP1Q9NZI2 227 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC2A6Q9UGQ3 507 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 ANXA10Q9UJ72 324 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 TP53TG5Q9Y2B4 290 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 POLR1DQ9Y2S0 133 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 PRELID3BQ9Y3B1 194 aa4.12□□□□□ -1.75
TOPBP1-210ENST00000572787 A0A087WUJ7 227 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 IGSF23A1L1A6 192 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 ZNF503-AS2A6NEH8 195 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 FAM159BA6NKW6 160 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 DHRS7CA6NNS2 312 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 F6UB75 175 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 K7EP13 123 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 SLC17A3O00476 420 aa4.11□□□□□ -1.75
TOPBP1-210ENST00000572787 PDE6DO43924 150 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms