RNA–Protein interactions for RNA: ENST00000569240.5

CNOT1-216, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CNOT1, Length 7,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-216ENST00000569240 IL22RA2Q969J5 263 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 PELI1Q96FA3 418 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 ULBP2Q9BZM5 246 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 RNF39Q9H2S5 420 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 TRAPPC2LQ9UL33 140 aa6.42□□□□□ -1.38
CNOT1-216ENST00000569240 LINC00587B1AMM8 73 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 DNASE2O00115 360 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CA11O75493 328 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 AVPR2P30518 371 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 GLIPR1P48060 266 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SLC25A34Q6PIV7 304 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 HTR3DQ70Z44 454 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 GLCCI1Q86VQ1 547 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 TP53INP2Q8IXH6 220 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SDF2Q99470 211 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 RSRP1Q9BUV0 290 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 HSPB7Q9UBY9 170 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MBD1Q9UIS9 605 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 TNFRSF10CO14798 259 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 HPXP02790 462 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 UBE2NP61088 152 aaKnown RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MSRB3Q8IXL7 192 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 TTC9BQ8N6N2 239 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 STXBP6Q8NFX7 210 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 OTOSQ8NHW6 89 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 IL17FQ96PD4 163 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 IL21Q9HBE4 155 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 GPR84Q9NQS5 396 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 NPDC1Q9NQX5 325 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 A0A1W2PN81 502 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MBLAC1A4D2B0 266 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 IFI6P09912 130 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 HIST1H1CP16403 213 aaKnown RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CHRNA7P36544 502 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 NKAIN4Q8IVV8 208 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 Q8IYB0 196 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CPT1CQ8TCG5 803 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CA5BP1Q8WTZ4 195 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SHDQ96IW2 340 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SAP30LQ9HAJ7 183 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CHST11Q9NPF2 352 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CLEC18AA5D8T8 446 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 FAM171A2A8MVW0 826 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 PEX12O00623 359 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MPDU1O75352 247 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MUC1P15941 1255 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 EPHA8P29322 1005 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 KIR2DS2P43631 304 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 PGGT1BP53609 377 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CTAG1AP78358 180 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 NHLH1Q02575 133 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 POU3F1Q03052 451 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 C9orf135Q5VTT2 229 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ETFBKMTQ8IXQ9 262 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ZNF511Q8NB15 262 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CLEC18CQ8NCF0 446 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ZBTB34Q8NCN2 500 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 DIO2Q92813 273 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SLX1AQ9BQ83 275 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 UBE2ZQ9H832 354 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 NPPBP16860 134 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 RCC1P18754 421 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 EN2P19622 333 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CDC34P49427 236 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 GNG4P50150 75 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 PLXDC1Q8IUK5 500 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ROBO4Q8WZ75 1007 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MIEN1Q9BRT3 115 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 RBM24Q9BX46 236 aaKnown RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 OCIAD1Q9NX40 245 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SLC2A8Q9NY64 477 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 CLCF1Q9UBD9 225 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 RREB1Q92766 1687 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 TMED7-TICAM2A0A0A6YYA0 188 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 A0A1W2PPE2 198 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 SLC31A1O15431 190 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ARG1P05089 322 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ICAM2P13598 275 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 HERVK_113P61574 105 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 ID2Q02363 134 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MRPL54Q6P161 138 aaKnown RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 C19orf48Q6RUI8 117 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 NIT1Q86X76 327 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 PNKDQ8N490 385 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 OR5A1Q8NGJ0 315 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 OR1F2PQ96R84 312 aa6.41□□□□□ -1.38
CNOT1-216ENST00000569240 MS4A7Q9GZW8 240 aaPredicted RBP6.41□□□□□ -1.38
CNOT1-216ENST00000569240 FEZF1A0PJY2 475 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 IKZF1Q13422 519 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 C1orf140Q5VVS0 124 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 TAS1R1Q7RTX1 841 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 WDFY1Q8IWB7 410 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 NECAP1Q8NC96 275 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 SIGLEC11Q96RL6 698 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 PLAGL1Q9UM63 463 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 ADAMTS5Q9UNA0 930 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 MYH13Q9UKX3 1938 aa6.4□□□□□ -1.38
CNOT1-216ENST00000569240 OTOL1A6NHN0 477 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 HOXB3P14651 431 aaPredicted RBP6.4□□□□□ -1.38
CNOT1-216ENST00000569240 POU3F2P20265 443 aaPredicted RBP6.4□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms