RNA–Protein interactions for RNA: ENST00000568477.5

CMTM3-215, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-215ENST00000568477 KLHDC2Q9Y2U9 406 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 GMPPBQ9Y5P6 360 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 NBEAL1Q6ZS30 2694 aa12.04□□□□□ -0.48
CMTM3-215ENST00000568477 A0A087WXM4 84 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 TRAV38-1A0A0B4J264 116 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 KIR2DS1A0A191URI9 304 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 OOEPA6NGQ2 149 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 TRIM64CA6NLI5 447 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 C3orf80F5H4A9 247 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 SLC2A5P22732 501 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 POLR2IP36954 125 aaKnown RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 RPL5P46777 297 aaKnown RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 NPY4RP50391 375 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 CRISP1P54107 249 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 PSMA6P60900 246 aaKnown RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 ESRRGP62508 458 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 HOXA4Q00056 320 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 LCN1P1Q5VSP4 162 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 FTMTQ8N4E7 242 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 SIGLECL1Q8N7X8 197 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 ZDHHC22Q8N966 263 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 GCDHQ92947 438 aaPredicted RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 UPRTQ96BW1 309 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 HRASLS5Q96KN8 279 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 TECTBQ96PL2 329 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 PAPOLGQ9BWT3 736 aaKnown RBP12.03□□□□□ -0.48
CMTM3-215ENST00000568477 PRRG3Q9BZD7 231 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 FAM192AQ9GZU8 254 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 ESM1Q9NQ30 184 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 ERVK-18Q9QC07 812 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 LAMP5Q9UJQ1 280 aa12.03□□□□□ -0.48
CMTM3-215ENST00000568477 TENM1Q9UKZ4 2725 aa12.02□□□□□ -0.48
CMTM3-215ENST00000568477 ANXA2P2A6NMY6 339 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 ADAM20O43506 726 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 NDUFA2O43678 99 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 ENSAO43768 121 aaKnown RBP12.02□□□□□ -0.49
CMTM3-215ENST00000568477 ALOX5APP20292 161 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 CXCR4P61073 352 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 UBA52P62987 128 aaKnown RBP12.02□□□□□ -0.49
CMTM3-215ENST00000568477 TUSC1Q2TAM9 212 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 C6orf141Q5SZD1 244 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF841Q6ZN19 808 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 DOK3Q7L591 496 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 KRT77Q7Z794 578 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 WDR86Q86TI4 376 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 GCSAMQ8N6F7 178 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 MICU1Q9BPX6 476 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 YIPF3Q9GZM5 350 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 MS4A7Q9GZW8 240 aaPredicted RBP12.02□□□□□ -0.49
CMTM3-215ENST00000568477 NDUFA13Q9P0J0 144 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 CTSZQ9UBR2 303 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 BLOC1S6Q9UL45 172 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 RHBDD3Q9Y3P4 386 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 LRP12Q9Y561 859 aa12.02□□□□□ -0.49
CMTM3-215ENST00000568477 IGHV3OR16-10A0A075B7F0 116 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 TRAV40A0A0B4J280 105 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 C22orf46C9J442 243 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 TFAP2AP05549 437 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 CCDC159P0C7I6 412 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 IGHV4-38-2P0DP08 117 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 CSNK2BP67870 215 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 IL5RAQ01344 420 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 CD276Q5ZPR3 534 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 KCTD18Q6PI47 426 aaPredicted RBP12.01□□□□□ -0.49
CMTM3-215ENST00000568477 BCL6BQ8N143 479 aaPredicted RBP12.01□□□□□ -0.49
CMTM3-215ENST00000568477 OR1M1Q8NGA1 313 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 OR8B12Q8NGG6 310 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 LRRC29Q8WV35 223 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 TEAD3Q99594 435 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 RTL8AQ9BWD3 113 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 ABCB9Q9NP78 766 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 ZNF391Q9UJN7 358 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 MPC1Q9Y5U8 109 aa12.01□□□□□ -0.49
CMTM3-215ENST00000568477 TMEM89A2RUT3 159 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 CCDC182A6NF36 153 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 LHBP01229 141 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 GYPAP02724 150 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 MRPL3P09001 348 aaKnown RBP12□□□□□ -0.49
CMTM3-215ENST00000568477 EGR1P18146 543 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 CRHBPP24387 322 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 MTNR1AP48039 350 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 COMPP49747 757 aaPredicted RBP12□□□□□ -0.49
CMTM3-215ENST00000568477 HCCSP53701 268 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 GABARAPL2P60520 117 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 FGF12P61328 243 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 PTGES3Q15185 160 aaKnown RBP12□□□□□ -0.49
CMTM3-215ENST00000568477 TEX36Q5VZQ5 186 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 DEGS2Q6QHC5 323 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 C9orf139Q6ZV77 190 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 FAM90A1Q86YD7 464 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 C11orf53Q8IXP5 236 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 ITPKCQ96DU7 683 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 PPP1R3EQ9H7J1 279 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 ZMAT3Q9HA38 289 aaKnown RBP12□□□□□ -0.49
CMTM3-215ENST00000568477 TMEM14AQ9Y6G1 99 aa12□□□□□ -0.49
CMTM3-215ENST00000568477 IGHV3OR15-7A0A075B7D8 119 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 SMIM31A0A1B0GVY4 71 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 DNAJC9-AS1A6NH13 148 aa11.99□□□□□ -0.49
CMTM3-215ENST00000568477 ACOD1A6NK06 481 aa11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms