RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, human

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COMMD4-215	ENST00000566843	PPP4R1L	Q9P1A2	415 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	PCNX3	Q9H6A9	2034 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	hCG_1809904	A0A1W2PP81	198 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843		A0A1W2PR64	198 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843		A0A1W2PRV1	198 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843		H0YIG0	161 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF20	P17024	532 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	IL11	P20809	199 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	AKT2	P31751	481 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	PTGER4	P35408	488 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR3A2	P47893	321 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	DAP3	P51398	398 aa	Known RBP	13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	TGIF1	Q15583	401 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	IAH1	Q2TAA2	248 aa	Predicted RBP	13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	TMPRSS9	Q7Z410	1059 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	FAM89B	Q8N5H3	189 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	C11orf40	Q8WZ69	217 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	SPACA1	Q9HBV2	294 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	C1orf123	Q9NWV4	160 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	MMACHC	Q9Y4U1	282 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	HS3ST3A1	Q9Y663	406 aa		13.85	□□□□□ -0.19
COMMD4-215	ENST00000566843	FOXI3	A8MTJ6	420 aa	Predicted RBP	13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	NPIPA5	E9PKD4	350 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	WRB	O00258	174 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SEC11B	P0C7V7	166 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	DANCR	P0C864	163 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	BTF3	P20290	206 aa	Known RBP	13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR3A4P	P47883	348 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	ZNF239	Q16600	458 aa	Known RBP	13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	MIDN	Q504T8	468 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	DBX2	Q6ZNG2	339 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	CYYR1	Q96J86	154 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	MESP1	Q9BRJ9	268 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	BANF2	Q9H503	90 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	PLEKHA2	Q9HB19	425 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SLC2A4RG	Q9NR83	387 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SUSD2	Q9UGT4	822 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	NPIPA1	Q9UND3	350 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	DOCK8	Q8NF50	2099 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	IFNA2	P01563	188 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	HTR5A	P47898	357 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SUCLG1	P53597	346 aa	Known RBP	13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SLC22A18AS	Q8N1D0	253 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	OR13H1	Q8NG92	308 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SSC4D	Q8WTU2	575 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	YPEL4	Q96NS1	127 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	SPACA5	Q96QH8	159 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	GAL3ST4	Q96RP7	486 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	RSRP1	Q9BUV0	290 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	NRSN2	Q9GZP1	204 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	MOB1A	Q9H8S9	216 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	KLHL13	Q9P2N7	655 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	DMRT1	Q9Y5R6	373 aa		13.84	□□□□□ -0.19
COMMD4-215	ENST00000566843	IGKV3D-11	A0A0A0MRZ8	115 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843		M0R036	132 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	KLF8	O95600	359 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	SULT1A1	P50225	295 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	SNU13	P55769	128 aa	Known RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	RAB1A	P62820	205 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	CSNK2A1	P68400	391 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	HSD11B2	P80365	405 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	ARFRP1	Q13795	201 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	SMRP1	Q8NCR6	262 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	CSNK2A3	Q8NEV1	391 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	OR1J1	Q8NGS3	322 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	OR51E1	Q8TCB6	317 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	URM1	Q9BTM9	101 aa	Known RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	PAPOLG	Q9BWT3	736 aa	Known RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	COL5A1	P20908	1838 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843		A0A1W2PP11	408 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	ZNF729	A6NN14	1252 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	SDCBP	O00560	298 aa	Predicted RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	DAO	P14920	347 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	RBMX	P38159	391 aa	Known RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	FOXRED2	Q8IWF2	684 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	C9orf40	Q8IXQ3	194 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	FAM24B	Q8N5W8	94 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	OR10H5	Q8NGA6	315 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	TSLP	Q969D9	159 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	GINS3	Q9BRX5	216 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	RAB33B	Q9H082	229 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	EHF	Q9NZC4	300 aa		13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843	C14orf166	Q9Y224	244 aa	Known RBP	13.83	□□□□□ -0.2
COMMD4-215	ENST00000566843		A0A0C4DFX4	3053 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	TRBV23-1	A0A0A0MS06	115 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	CDC14C	A4D256	554 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	TMEM150C	B9EJG8	249 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	MASP2	O00187	686 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	ADAM10	O14672	748 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	ECI1	P42126	302 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	TFF2	Q03403	129 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	PLCXD2	Q0VAA5	305 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	HIST2H3A	Q71DI3	136 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	H1FNT	Q75WM6	255 aa	Predicted RBP	13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	WDSUB1	Q8N9V3	476 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	MFSD8	Q8NHS3	518 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	FNDC9	Q8TBE3	224 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	ERGIC1	Q969X5	290 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	GNRHR2	Q96P88	292 aa		13.82	□□□□□ -0.2
COMMD4-215	ENST00000566843	ST6GALNAC5	Q9BVH7	336 aa		13.82	□□□□□ -0.2

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